Q6LGJ5 (Q6LGJ5_PHOPR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Hypothetical exopolygalacturonate lyase EMBL CAG23585.1

Gene names

Name:	PELX EMBL CAG23585.1
Ordered Locus Names:	PBPRB1725

Organism

Photobacterium profundum (Photobacterium sp. (strain SS9)) [Complete proteome] [HAMAP]

Taxonomic identifier

74109 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Photobacterium

Protein attributes

Sequence length	711 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAG23585.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6LGJ5 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: 19F987B1BD09BBAD	FASTA	711	77,745
	10 20 30 40 50 60 MTFGQSTDLN FGSTILPEKV GLNQVTVNGE RVQDGSLEQK VTIESRGGKL ANSHEGLTFY 70 80 90 100 110 120 YTEIPTEYNF TLSADIELEQ LGPETGATPN RQEGSGIMVR DILGTERLMP QPEGHEEFPS 130 140 150 160 170 180 ASNMVMNLMR SHTRTNDGMT NINASFREGV YQPWGTAGNK LSRVDYMEGV PYGVTKTYRM 190 200 210 220 230 240 SLTRNNAGFE VSYQNGNVSE THAVKGANAN IVEMQNAESQ YIGFFASRNA KINVSDVELT 250 260 270 280 290 300 LSPAKTIDAV KYEAKQGDTV FEIASPTKSA LEIYPVQARA NYTGTFEVSQ NGSVIANTNV 310 320 330 340 350 360 NAGELFNHTA MLSKGDNDFS VTFTALEGPN RDAMTETFSV TQVAVSNTEQ IYVSPRGSAK 370 380 390 400 410 420 ADGSPSQPFD LASAIEILPA GGTIILQQGD YAQLTLPISV SGTAEEPKYL KAENNKVRFV 430 440 450 460 470 480 GELVHKANYW RYEGIEVAGA SFIVHGSHNT FEKMTTHGAP DTGFQITSPE NIGRSLWASY 490 500 510 520 530 540 NTVIDSESYN NMDPSQINAD GFAAKMRIGD GNTFIRCISH HNIDDGWDLF NKVEDGPNGA 550 560 570 580 590 600 VTIQDSIAFN NGRTLDVSNK GGTIGNGFKL GGEGIPVPHV VKNNLSFNNN MDGFTDNFNP 610 620 630 640 650 660 GSITVSNNVA IDNKRFNYLF RQSPYSDDIK QGEFLNNASY RFNVESRYDD VVNSDQSDGN 670 680 690 700 710 LFIQDGKTVD QNDQVVDLKV LRSMKQASII DLNSPVPGMA EALQLKQMMN R

References

[1]

"Life at depth: Photobacterium profundum genome sequence and expression analysis." Vezzi A., Campanaro S., D'Angelo M., Simonato F., Vitulo N., Lauro F.M., Cestaro A., Malacrida G., Simionati B., Cannata N., Romualdi C., Bartlett D.H., Valle G. Science 307:1459-1461(2005) [PubMed: 15746425] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR378680 Genomic DNA. Translation: CAG23585.1.
RefSeq	YP_133385.1. NC_006371.1.
3D structure databases
ProteinModelPortal	Q6LGJ5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3121801.
GenomeReviews	Gene locus PBPRB1725 in contig CR354532_GR.
KEGG	ppr:PBPRB1725.
NMPDR	fig|298386.1.peg.1846.
PATRIC	22942167. VBIPhoPro109272_5638.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG297091.
OMA	DGFTDNF.
ProtClustDB	CLSK908043.
Enzyme and pathway databases
BioCyc	PPRO298386:PBPRB1725-MONOMER.
Family and domain databases
InterPro	IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6LGJ5_PHOPR

Accession

Primary (citable) accession number: Q6LGJ5

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)