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Protein
Submitted name:

IMV transmembrane protein

Gene

List109

Organism
Vaccinia virus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
IMV transmembrane proteinImported
Submitted name:
ORF8 cdsImported
Gene namesi
ORF Names:List109Imported
OrganismiVaccinia virusImported
Taxonomic identifieri10245 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePoxviridaeChordopoxvirinaeOrthopoxvirus
Proteomesi
  • UP000180811 Componenti: Genome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei276 – 294HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ6LDV9.
SMRiQ6LDV9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 235Alpha-carbonic anhydraseInterPro annotationAdd BLAST235

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

KOiK01672.

Family and domain databases

Gene3Di3.10.200.10. 1 hit.
InterProiView protein in InterPro
IPR001148. Carbonic_anhydrase_a.
IPR023561. Carbonic_anhydrase_a-class.
PANTHERiPTHR18952. PTHR18952. 1 hit.
PfamiView protein in Pfam
PF00194. Carb_anhydrase. 1 hit.
SMARTiView protein in SMART
SM01057. Carb_anhydrase. 1 hit.
SUPFAMiSSF51069. SSF51069. 1 hit.
PROSITEiView protein in PROSITE
PS51144. ALPHA_CA_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6LDV9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPQQLSPINI ETKKAISNAR LKPLDIHYNE SKPTTIQNTG KLVRINFKGG
60 70 80 90 100
YISGGFLPNE YVLSSLHIYW GKEDDYGSNH LIDVYKYSGE INLVHWNKKK
110 120 130 140 150
YSSYEEAKKH DDGLIIISIF LQVLDHKNVY FQKIVNQLDS IRSANTSAPF
160 170 180 190 200
DSVFYLDNLL PSKLDYFTYL GTTINHSADA VWIIFPTPIN IHSDQLSKFR
210 220 230 240 250
TLLSSSNHDG KPHYITENYR NPYKLNDDTQ VYYSGEIIRA ATTSPARENY
260 270 280 290 300
FMRWLSDLRE TCFSYYQKYI EENKTFAIIA IVFVFILTAI LFFMSRRYSR

EKQN
Length:304
Mass (Da):35,446
Last modified:April 18, 2006 - v1
Checksum:i67F195C8875455BA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M15058 Genomic DNA. Translation: AAA48264.1.
DQ121394 Genomic DNA. Translation: ABD52586.1.
RefSeqiYP_232995.1. NC_006998.1.

Genome annotation databases

GeneIDi3707569.
KEGGivg:3707569.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M15058 Genomic DNA. Translation: AAA48264.1.
DQ121394 Genomic DNA. Translation: ABD52586.1.
RefSeqiYP_232995.1. NC_006998.1.

3D structure databases

ProteinModelPortaliQ6LDV9.
SMRiQ6LDV9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3707569.
KEGGivg:3707569.

Phylogenomic databases

KOiK01672.

Family and domain databases

Gene3Di3.10.200.10. 1 hit.
InterProiView protein in InterPro
IPR001148. Carbonic_anhydrase_a.
IPR023561. Carbonic_anhydrase_a-class.
PANTHERiPTHR18952. PTHR18952. 1 hit.
PfamiView protein in Pfam
PF00194. Carb_anhydrase. 1 hit.
SMARTiView protein in SMART
SM01057. Carb_anhydrase. 1 hit.
SUPFAMiSSF51069. SSF51069. 1 hit.
PROSITEiView protein in PROSITE
PS51144. ALPHA_CA_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ6LDV9_9POXV
AccessioniPrimary (citable) accession number: Q6LDV9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 10, 2017
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.