Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q6LCR5 (Q6LCR5_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
DNA-directed RNA polymerase RuleBase RU004279

EC=2.7.7.6 RuleBase RU004279
Gene names
Name:Polr1a RGD 620824
Synonyms:Rpo1-4 RGD 620824
OrganismRattus norvegicus (Rat) EMBL AAC99958.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length86 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). RuleBase RU004279

Sequence similarities

Belongs to the RNA polymerase beta' chain family. RuleBase RU004279

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAC99958.1
Non-terminal residue861 EMBL AAC99958.1

Sequences

Sequence LengthMass (Da)Tools
Q6LCR5 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 1FBC864CE073E33B

FASTA869,655
        10         20         30         40         50         60 
AHFPQSELGR AEAYVLACTD QQYLVPKDGQ PLAGLIQDHM VSGANMTIRG CFFTREQYME 

        70         80 
LVYRGLTDKV GRVKLFPPAI LKPFPL 

« Hide

References

[1]Wang D., Stetler D.A.
Submitted (AUG-1995) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Liver EMBL AAC99958.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U33459 mRNA. Translation: AAC99958.1.
UniGeneRn.24877.

3D structure databases

ProteinModelPortalQ6LCR5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD620824. Polr1a.

Phylogenomic databases

HOGENOMHOG000205401.
InParanoidQ6LCR5.

Gene expression databases

ArrayExpressQ6LCR5.
GenevestigatorQ6LCR5.

Family and domain databases

InterProIPR015699. DNA-dir_RNA_pol1_lsu.
IPR007066. RNA_pol_Rpb1_3.
[Graphical view]
PANTHERPTHR19376:SF11. PTHR19376:SF11. 1 hit.
PfamPF04983. RNA_pol_Rpb1_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6LCR5_RAT
AccessionPrimary (citable) accession number: Q6LCR5
Entry history
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: March 19, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)