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Protein

Probable protein phosphatase 2C 52

Gene

Os05g0587100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi265Manganese 1By similarity1
Metal bindingi265Manganese 2By similarity1
Metal bindingi266Manganese 1; via carbonyl oxygenBy similarity1
Metal bindingi427Manganese 2By similarity1
Metal bindingi466Manganese 2By similarity1

GO - Molecular functioni

Keywordsi

Molecular functionHydrolase, Protein phosphatase
LigandMagnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 52 (EC:3.1.3.16)
Short name:
OsPP2C52
Gene namesi
Ordered Locus Names:Os05g0587100, LOC_Os05g50970
ORF Names:OJ1007_H05.6, OsJ_000225
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 5

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003632991 – 491Probable protein phosphatase 2C 52Add BLAST491

Proteomic databases

PaxDbiQ6L5C4

Expressioni

Gene expression databases

ExpressionAtlasiQ6L5C4 differential
GenevisibleiQ6L5C4 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os05g50970.1

Structurei

3D structure databases

ProteinModelPortaliQ6L5C4
SMRiQ6L5C4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini229 – 475PPM-type phosphatasePROSITE-ProRule annotationAdd BLAST247

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi14 – 51Ala-richAdd BLAST38
Compositional biasi94 – 213Glu-richAdd BLAST120

Sequence similaritiesi

Belongs to the PP2C family.Curated

Phylogenomic databases

eggNOGiKOG0698 Eukaryota
COG0631 LUCA
HOGENOMiHOG000233896
InParanoidiQ6L5C4
KOiK17506
OMAiRAGGKMM
OrthoDBiEOG09360FJK

Family and domain databases

CDDicd00143 PP2Cc, 1 hit
Gene3Di3.60.40.10, 1 hit
InterProiView protein in InterPro
IPR015655 PP2C
IPR000222 PP2C_BS
IPR036457 PPM-type_dom_sf
IPR001932 PPM-type_phosphatase_dom
PANTHERiPTHR13832 PTHR13832, 1 hit
PfamiView protein in Pfam
PF00481 PP2C, 1 hit
SMARTiView protein in SMART
SM00331 PP2C_SIG, 1 hit
SM00332 PP2Cc, 1 hit
SUPFAMiSSF81606 SSF81606, 1 hit
PROSITEiView protein in PROSITE
PS01032 PPM_1, 1 hit
PS51746 PPM_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q6L5C4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVYDGAVKDQ ESSANPASAS AALSEASAAA SEVTAAAAAG AGAGAAEEGA
60 70 80 90 100
AVSGRPPRPP HDKRLGVRHP LKHRRFRAGG KVMVEPGDPP SAQEVADEEA
110 120 130 140 150
SEVEQEAAPV EREPPQEEGG DVEVSSAPAE MEVVEGDAME VSPEPAVAVG
160 170 180 190 200
ESELEGRPGE EEEVSSPVVS QGERKQETAA AAPVPAVEEK KHKDQENKHK
210 220 230 240 250
EREREKERER VDEVGYMSGG WKSEDGFLSC GYSSFRGKRA SMEDFYDIKS
260 270 280 290 300
SKIDDKQISL FGIFDGHGGS RAAEYLKEHL FENLMKHPEF MTNTKLAISE
310 320 330 340 350
TYKKTDSEFL DSESHTHRDD GSTASTAVLV GNHLYVANVG DSRAVISKAG
360 370 380 390 400
KAIALSEDHK PNRSDERKRI ESAGGVVMWA GTWRVGGVLA MSRAFGNRLL
410 420 430 440 450
KQFVVADPEI QEQEIDDELE FLILASDGLW DVVPNEDAVS LVKIEEEPEA
460 470 480 490
AARKLTETAF SRGSGDNITC IVVKFQHDKM DGDSSPTSDK S
Length:491
Mass (Da):52,919
Last modified:July 5, 2004 - v1
Checksum:i5FBEA073B5D07327
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC098598 Genomic DNA Translation: AAT44157.1
AP008211 Genomic DNA Translation: BAF18381.1
AP014961 Genomic DNA Translation: BAS95584.1
CM000138 Genomic DNA Translation: EAZ10400.1
AK101645 mRNA Translation: BAG95168.1
RefSeqiXP_015640009.1, XM_015784523.1
UniGeneiOs.5928

Genome annotation databases

EnsemblPlantsiOs05t0587100-01; Os05t0587100-01; Os05g0587100
GeneIDi4339763
GrameneiOs05t0587100-01; Os05t0587100-01; Os05g0587100
KEGGiosa:4339763

Similar proteinsi

Entry informationi

Entry nameiP2C52_ORYSJ
AccessioniPrimary (citable) accession number: Q6L5C4
Secondary accession number(s): A0A0P0WR20
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: July 5, 2004
Last modified: May 23, 2018
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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