Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q6L597 (BGL23_ORYSJ) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative beta-glucosidase 23

Short name=Os5bglu23
EC=3.2.1.21
Gene names
Name:BGLU23
Ordered Locus Names:Os05g0366800, LOC_Os05g30390
ORF Names:OJ1393_A07.1, OSJNBa0090H02.13
OrganismOryza sativa subsp. japonica (Rice) [Reference proteome]
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceUncertain

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

Caution

Could be the product of a pseudogene.

Sequence caution

The sequence AAT38010.1 differs from that shown. Reason: Erroneous gene model prediction.

The sequence AAV31360.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-glucosidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential
Chain30 – 542513Putative beta-glucosidase 23
PRO_0000390340

Regions

Region483 – 4842Substrate binding By similarity

Sites

Active site2621Proton donor By similarity
Binding site881Substrate By similarity
Binding site2161Substrate By similarity
Binding site4051Substrate By similarity
Binding site4761Substrate By similarity

Amino acid modifications

Glycosylation341N-linked (GlcNAc...) Potential
Glycosylation1351N-linked (GlcNAc...) Potential
Glycosylation4451N-linked (GlcNAc...) Potential
Disulfide bond281 ↔ 289 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6L597 [UniParc].

Last modified December 15, 2009. Version 2.
Checksum: 011A7FC047901C4B

FASTA54260,955
        10         20         30         40         50         60 
MAACTSSLVS LLLLLLLLLL LLVAGEATAE AALNFTRQDF PGGLRRRHIC LPGFRDADSI 

        70         80         90        100        110        120 
TFPRDIESLT CGTHMCLDPR GSHTSVTQCH GECHRRNVIE SQSRFRRTYE GATGEDGRTP 

       130        140        150        160        170        180 
SIWDTFTHSG RMADNSTGDR AAAGYHKYKE DVKLMSDTGL EAYRFSISWS RLIPRGRGPI 

       190        200        210        220        230        240 
NPKGLEYYND LIDKLVKRGE ICDCSMGIEI HVTLYHLDFP QALQDEYNGW LSPRIIEDFT 

       250        260        270        280        290        300 
AYADVCFREF GDLVRHWTTV GEPNVLSIAG YDSGVIPPCR CSPPFGTSCA AGDSTVEPYF 

       310        320        330        340        350        360 
AAHNSILAHA SAVRLYWDKY QAKQKGVVGT NIYSFWPYPL SRSCADIDAV QRVLDFTIGW 

       370        380        390        400        410        420 
ILDPLVYGDY PEIMKKQAGS RIPSFTKEQS ELIRGSADFI GINHYKSLYV SDGSNREKAG 

       430        440        450        460        470        480 
LRDYNADMAA HFRGFGQFDK EDSLNDTERV EYLSSYMGGT LAALRNGANV KGYFVWSFLD 

       490        500        510        520        530        540 
VFELFAGYHS PFGLHHVDFE DPSLPRQPKL SAQWYSKFLR SEIGINIEKM VSPDEHEHAY 


YQ 

« Hide

References

« Hide 'large scale' references
[1]"A fine physical map of the rice chromosome 5."
Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J., Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S., Shaw J.-F., Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.
Mol. Genet. Genomics 274:337-345(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"Analysis of rice glycosyl hydrolase family 1 and expression of Os4bglu12 beta-glucosidase."
Opassiri R., Pomthong B., Onkoksoong T., Akiyama T., Esen A., Ketudat Cairns J.R.
BMC Plant Biol. 6:33-33(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC104279 Genomic DNA. Translation: AAT38010.1. Sequence problems.
AC137618 Genomic DNA. Translation: AAV31360.1. Sequence problems.

3D structure databases

ProteinModelPortalQ6L597.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING39947.LOC_Os05g30390.1.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Proteomic databases

PRIDEQ6L597.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GrameneQ6L597.

Phylogenomic databases

eggNOGCOG2723.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR001360. Glyco_hydro_1.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 2 hits.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameBGL23_ORYSJ
AccessionPrimary (citable) accession number: Q6L597
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 2009
Last sequence update: December 15, 2009
Last modified: March 19, 2014
This is version 47 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries