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Protein

DNA repair and recombination protein RadA

Gene

radA

Organism
Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.UniRule annotation

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi114 – 121ATPUniRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processDNA damage, DNA recombination
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciPTOR263820:G1G0U-796-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA repair and recombination protein RadAUniRule annotation
Gene namesi
Name:radAUniRule annotation
Ordered Locus Names:PTO0741
OrganismiPicrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
Taxonomic identifieri263820 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermoplasmataThermoplasmatalesPicrophilaceaePicrophilus
Proteomesi
  • UP000000438 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001501011 – 323DNA repair and recombination protein RadAAdd BLAST323

Interactioni

Protein-protein interaction databases

STRINGi263820.PTO0741

Structurei

3D structure databases

ProteinModelPortaliQ6L126
SMRiQ6L126
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic RecA-like protein family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG00415 Archaea
COG0468 LUCA
HOGENOMiHOG000227426
KOiK04483
OMAiYNTDHQT
OrthoDBiPOG093Z04YH

Family and domain databases

CDDicd01123 Rad51_DMC1_radA, 1 hit
HAMAPiMF_00348 RadA_arch, 1 hit
InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR013632 DNA_recomb/repair_Rad51_C
IPR011938 DNA_recomb/repair_RadA
IPR016467 DNA_recomb/repair_RecA-like
IPR010995 DNA_repair_Rad51/TF_NusA_a-hlx
IPR003583 Hlx-hairpin-Hlx_DNA-bd_motif
IPR027417 P-loop_NTPase
IPR033925 Rad51_DMC1_RadA
IPR020588 RecA_ATP-bd
IPR020587 RecA_monomer-monomer_interface
PfamiView protein in Pfam
PF08423 Rad51, 1 hit
PIRSFiPIRSF005856 Rad51, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SM00278 HhH1, 2 hits
SUPFAMiSSF47794 SSF47794, 1 hit
SSF52540 SSF52540, 1 hit
TIGRFAMsiTIGR02236 recomb_radA, 1 hit
PROSITEiView protein in PROSITE
PS50162 RECA_2, 1 hit
PS50163 RECA_3, 1 hit

Sequencei

Sequence statusi: Complete.

Q6L126-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKNDKEKRE LTIEDLPGVG DATAEKLRES GYDDIMTIAV ASPKDLAEIS
60 70 80 90 100
GIAEGAAIKI INAARKYADV GNFETGEEIL NKRKEIKKLT TGSSNLDNLL
110 120 130 140 150
GGGLETQSIT EFFGEFGSGK TQIMHQLAVN ATMPVEKNGF DSDVLIIDTE
160 170 180 190 200
NTFRPERIIQ MARAKDLDPD QTLERIHVAR AYNSHHQILL AEKAADMARE
210 220 230 240 250
YKIRLLIVDS LTSHFRSEYV GRGSLAERQQ LLNRHMHDLL KFGTIYNAVI
260 270 280 290 300
AVTNQVSANP AVFFGDPMNP IGGNIVGHTA TFRIYLRKAK AGKRIARLID
310 320
SPYLPEGETV ITITESGITD GEK
Length:323
Mass (Da):35,657
Last modified:July 5, 2004 - v1
Checksum:i1FC6827E640BD6F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017261 Genomic DNA Translation: AAT43326.1
RefSeqiWP_011177542.1, NC_005877.1

Genome annotation databases

EnsemblBacteriaiAAT43326; AAT43326; PTO0741
GeneIDi2845061
KEGGipto:PTO0741
PATRICifig|263820.9.peg.776

Similar proteinsi

Entry informationi

Entry nameiRADA_PICTO
AccessioniPrimary (citable) accession number: Q6L126
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: July 5, 2004
Last modified: March 28, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

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