Q6KC13 (Q6KC13_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha-2,8-sialyltransferase ST8Sia I EMBL CAG29374.1
EC=2.4.99.8 EMBL CAG29374.1

Submitted name:
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 EMBL CAM56534.1 Ensembl ENSDARP00000103508

Gene names

Name:	st8sia1 EMBL CAM56534.1 Ensembl ENSDARP00000103508 ZFIN ZDB-GENE-051005-1
Synonyms:	siat 8A EMBL CAG29374.1
ORF Names:	DKEY-117O14.5-001 EMBL CAM56534.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL CAG29374.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	339 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Cellular component	Golgi apparatus SAAS SAAS012163 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS012163
Molecular function	Glycosyltransferase SAAS SAAS012163 EMBL CAG29374.1 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	protein glycosylation Inferred from electronic annotation. Source: InterPro
Cellular component	integral to Golgi membrane Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL CAG29374.1
	Non-terminal residue	339	1	EMBL CAG29374.1

Sequences

	Sequence		Length	Mass (Da)
	Q6KC13 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: A8C5D504928431E9	FASTA	339	38,844
	10 20 30 40 50 60 MVSLRCHRSK YIWATLGVLA LLWLYIFPVY RIPSDKEMVE EVLRQGQTWS RNQTAVELYR 70 80 90 100 110 120 KLLTDCCNPK RMFAVTKENS PLGKVLWYDG EFYHYHTVTN ETYPIFVQDT PLQLPLKRCS 130 140 150 160 170 180 VVGNGGVLKH SGCGNEIDRA DFIMRCNLPP LSKDYTDDVG TKTHLVSANP SIIEKSFQNL 190 200 210 220 230 240 LWSRKSFVES MKAYGSSYIY IPAFSMKPGT DPSLRAYHAL ADSSSNQTVL FANPDFLKNV 250 260 270 280 290 300 GIFWKNHGVH GKRLSTGLFL VSLALGLCEE VTAYGFWPFS VGLDERPVSH HYYDNILPSS 310 320 330 RFHAMPEEFL QLWHLHKSGT LRMRVGSCAK ERMELKREK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The animal sialyltransferases and sialyltransferase-related genes: a phylogenetic approach." Harduin-Lepers A., Mollicone R., Delannoy P., Oriol R. Glycobiology 15:805-817(2005) [PubMed: 15843597] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000103508.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000103508.
[4]	McGuire S. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ715535 mRNA. Translation: CAG29374.1. BX640577 Genomic DNA. Translation: CAM56534.1.
IPI	IPI00488564.
RefSeq	XP_002661434.1. XM_002661388.2.
UniGene	Dr.151858. Dr.79084.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	GT29. Glycosyltransferase Family 29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000114988; ENSDARP00000103508; ENSDARG00000074347.
GeneID	100333872.
KEGG	dre:100333872.
Organism-specific databases
ZFIN	ZDB-GENE-051005-1. st8sia1.
Phylogenomic databases
GeneTree	ENSGT00550000074407.
HOGENOM	HBG717846.
HOVERGEN	HBG106106.
InParanoid	Q6KC13.
OMA	VFPVYRL.
PhylomeDB	Q6KC13.
Gene expression databases
Bgee	Q6KC13.
Family and domain databases
InterPro	IPR001675. Glyco_trans_29. IPR012163. Sialyl_trans. [Graphical view]
KO	K03371.
Pfam	PF00777. Glyco_transf_29. 1 hit. [Graphical view]
PIRSF	PIRSF005557. Sialyl_trans. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6KC13_DANRE

Accession

Primary (citable) accession number: Q6KC13

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)