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Protein

Zinc finger CCCH domain-containing protein 19

Gene

Os02g0831100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri16 – 45C3H1-type 1PROSITE-ProRule annotationAdd BLAST30
Zinc fingeri47 – 73C3H1-type 2PROSITE-ProRule annotationAdd BLAST27
Zinc fingeri109 – 136C3H1-type 3PROSITE-ProRule annotationAdd BLAST28

GO - Molecular functioni

Keywordsi

Molecular functionDNA-binding
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Zinc finger CCCH domain-containing protein 19
Short name:
OsC3H19
Gene namesi
Ordered Locus Names:Os02g0831100, LOC_Os02g58440
ORF Names:OJ1149_C12.8, OsJ_008677
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 2

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003468151 – 647Zinc finger CCCH domain-containing protein 19Add BLAST647

Proteomic databases

PaxDbiQ6K977.
PRIDEiQ6K977.

PTM databases

iPTMnetiQ6K977.

Expressioni

Gene expression databases

GenevisibleiQ6K977. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g58440.1.

Structurei

3D structure databases

SMRiQ6K977.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri16 – 45C3H1-type 1PROSITE-ProRule annotationAdd BLAST30
Zinc fingeri47 – 73C3H1-type 2PROSITE-ProRule annotationAdd BLAST27
Zinc fingeri109 – 136C3H1-type 3PROSITE-ProRule annotationAdd BLAST28

Keywords - Domaini

Repeat, Zinc-finger

Phylogenomic databases

eggNOGiKOG4791. Eukaryota.
ENOG41101ZI. LUCA.
HOGENOMiHOG000239634.
InParanoidiQ6K977.
OrthoDBiEOG0936093G.

Family and domain databases

Gene3Di4.10.1000.10. 2 hits.
InterProiView protein in InterPro
IPR000571. Znf_CCCH.
SMARTiView protein in SMART
SM00356. ZnF_C3H1. 3 hits.
SUPFAMiSSF90229. SSF90229. 1 hit.
PROSITEiView protein in PROSITE
PS50103. ZF_C3H1. 3 hits.

Sequencei

Sequence statusi: Complete.

Q6K977-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDSAVRPPVD AEEARRRRST DCIYFLASPL TCKKGSECEY RHSDAARMNP
60 70 80 90 100
RDCWYWFNGN CANPKCSFRH PPLDGLVGAP TTPRTSQQSA PQVSVPAQAP
110 120 130 140 150
VPNPASGTAK QGVPCYYFQK GMCVKGDRCA FLHLPQATGS PAPQHTTKVF
160 170 180 190 200
APASVPHPQL KNSWTKPNSS AQQNAPPAIF DKPKDSAHNG KTAQKQNLTN
210 220 230 240 250
RAGHSSGIIH DKKGSYMPSG VTKNYRPPPS TGDDLAENGV EMGEFVREPS
260 270 280 290 300
PGSDVLTGGA DDNTEQSLRE DRGAYRRTNG EQHIGMLRQT HDSYGFERSH
310 320 330 340 350
RGSAEKLLSE SRFSQREPMP LTADSSDLRQ RLLKQRRLNN PRSGQVSDRH
360 370 380 390 400
NVYPEDERHD RHRQRGEEQA SNDGVSSSRL RGRIRLPAET TFDRLGLQPE
410 420 430 440 450
KERDRGPRAR LSPPSQTDLR GKLHDRLKAK PNEDVSGNVQ SSLSKANEDA
460 470 480 490 500
ESLNFAGPKS LAELKAKKVA GSLMKSSRSL TGPVRMTSEI VTIKDSSDPV
510 520 530 540 550
LFDGPKPLNA ILKRKREADS GNATDFGSKR EEHSGGDEEG SQNDFRNIED
560 570 580 590 600
DIVGMNTEGN GEEAFQPEDD VVYGDSLSPA DDIAAEAADD ASRELEEQQD
610 620 630 640
VETAEEYDYE MDDVNAAEEN DYQEYEDEDD DLEDDDDFAR KVGVMIT
Length:647
Mass (Da):71,469
Last modified:September 2, 2008 - v2
Checksum:i26F44EEE71A69256
GO

Sequence cautioni

The sequence BAD23001 differs from that shown. Reason: Erroneous gene model prediction.Curated
The sequence BAF10530 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004082 Genomic DNA. Translation: BAD23001.1. Sequence problems.
AP008208 Genomic DNA. Translation: BAF10530.1. Sequence problems.
AP014958 Genomic DNA. No translation available.
CM000139 Genomic DNA. Translation: EAZ25194.1.
AK060600 mRNA. No translation available.
RefSeqiXP_015626088.1. XM_015770602.1.
UniGeneiOs.81520.

Genome annotation databases

GeneIDi4331248.
KEGGiosa:4331248.

Similar proteinsi

Entry informationi

Entry nameiC3H19_ORYSJ
AccessioniPrimary (citable) accession number: Q6K977
Secondary accession number(s): A3AD05
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: September 2, 2008
Last modified: August 30, 2017
This is version 65 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations