Q6K959 (Q6K959_ORYSJ) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 45.
History...
Names and origin
| Protein names | Submitted name: N-acetylglucosaminyltransferase I-like protein EMBL BAD23019.1 Submitted name: Os02g0832800 protein EMBL BAF10545.1 Submitted name: cDNA clone:J033046P17, full insert sequence EMBL BAG95103.1 | ||||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) EMBL BAD23019.1 | ||||||
| Taxonomic identifier | 39947 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 442 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Glycosyltransferase EMBL BAD23019.1 Transferase |
| Gene Ontology (GO) | |
| Cellular component | Golgi membrane Inferred from electronic annotation. Source: InterPro |
| Molecular function | alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The genomes of Oryza sativa: a history of duplications." Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. Yang H.PLoS Biol. 3:266-281(2005) [PubMed: 15685292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice." Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K. Hayashizaki Y.Science 301:376-379(2003) Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "The map-based sequence of the rice genome." International Rice Genome Sequencing Project Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N., Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y., Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N. Sasaki T.Nature 436:793-800(2005) Cited for: NUCLEOTIDE SEQUENCE. |
| [4] | "Curated Genome Annotation of Oryza sativa ssp. japonica and Comparative Genome Analysis with Arabidopsis thaliana." The Rice Annotation Project (RAP) Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B., Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., Harada E. Sasaki T.Genome Res. 17:175-183(2007) Cited for: NUCLEOTIDE SEQUENCE. |
| [5] | "The Rice Annotation Project Database (RAP-DB): 2008 update." The Rice Annotation Project (RAP) Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H. Echeverria M.Nucleic Acids Res. 36:D1028-D1033(2008) Cited for: NUCLEOTIDE SEQUENCE. |
| [6] | "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information." Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T., Gojobori T., Sasaki T. Nucleic Acids Res. 34:D741-D744(2006) [PubMed: 16381971] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [7] | "Improved gene annotation of the rice (Oryza sativa) genomes." Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J., Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R., Kristiansen K., Wong G.K.-S. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [8] | Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J., Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R., Kristiansen K., Wong G.K.-S. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [9] | "The Second Rice Annotation Project Meeting (RAP2)." The Rice Annotation Project (RAP) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [10] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2, BAC clone:OJ1282_E10." Sasaki T., Matsumoto T., Katayose Y. Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [11] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2." IRGSP(International Rice Genome Sequencing Project) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [12] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2, BAC clone:OJ1149_C12." Sasaki T., Matsumoto T., Yamamoto K. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AP004082 Genomic DNA. Translation: BAD23019.1. AP005290 Genomic DNA. Translation: BAD28450.1. AP008208 Genomic DNA. Translation: BAF10545.1. AK101526 mRNA. Translation: BAG95103.1. CM000139 Genomic DNA. Translation: EEE58118.1. |
| RefSeq | NP_001048631.1. NM_001055166.1. |
| UniGene | Os.17972. |
3D structure databases | |
| ProteinModelPortal | Q6K959. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q6K959. |
Protein family/group databases | |
| CAZy | GT13. Glycosyltransferase Family 13. |
Proteomic databases | |
| PRIDE | Q6K959. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | LOC_Os02g58590.1; LOC_Os02g58590.1; LOC_Os02g58590. |
| GeneID | 4331263. |
| KEGG | osa:4331263. |
Organism-specific databases | |
| Gramene | Q6K959. |
Phylogenomic databases | |
| GeneTree | EPGT00050000011530. |
| HOGENOM | HBG717617. |
| OMA | PPDHRKF. |
| PhylomeDB | Q6K959. |
| ProtClustDB | CLSN2680320. |
Family and domain databases | |
| InterPro | IPR004139. Glyco_trans_13. [Graphical view] |
| KO | K00726. |
| PANTHER | PTHR10468. Glyco_trans_13. 1 hit. |
| Pfam | PF03071. GNT-I. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q6K959_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q6K959 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
