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Q6K5F8

- CDKG1_ORYSJ

UniProt

Q6K5F8 - CDKG1_ORYSJ

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Protein

Cyclin-dependent kinase G-1

Gene

CDKG-1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

ATP + a protein = ADP + a phosphoprotein.
ATP + [DNA-directed RNA polymerase] = ADP + [DNA-directed RNA polymerase] phosphate.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei378 – 3781ATPPROSITE-ProRule annotation
Active sitei473 – 4731Proton acceptorPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi355 – 3639ATPPROSITE-ProRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. cyclin-dependent protein serine/threonine kinase activity Source: UniProtKB-EC
  3. RNA polymerase II carboxy-terminal domain kinase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

Kinase, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Cyclin-dependent kinase G-1 (EC:2.7.11.22, EC:2.7.11.23)
Short name:
CDKG;1
Gene namesi
Name:CDKG-1
Ordered Locus Names:Os02g0602100, LOC_Os02g39010
ORF Names:OJ1669_F01.7, OJ1791_B03.45
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 2

Organism-specific databases

GrameneiQ6K5F8.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 693693Cyclin-dependent kinase G-1PRO_0000296110Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei359 – 3591PhosphothreonineBy similarity
Modified residuei360 – 3601PhosphotyrosineBy similarity
Modified residuei500 – 5001PhosphoserineBy similarity
Modified residuei506 – 5061PhosphothreonineBy similarity

Keywords - PTMi

Phosphoprotein

Expressioni

Inductioni

By cytokinin.1 Publication

Gene expression databases

ExpressionAtlasiQ6K5F8. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ6K5F8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini349 – 640292Protein kinasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 protein kinase domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG0515.
InParanoidiQ6K5F8.
KOiK08818.
OMAiTMKQPYS.

Family and domain databases

InterProiIPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR002290. Ser/Thr_dual-sp_kinase.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamiPF00069. Pkinase. 1 hit.
[Graphical view]
SMARTiSM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6K5F8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAGSHGGYR GYEVAREREH DVGVSRRSKE HYHHRHPSRH RDSERRRDGG
60 70 80 90 100
RSGGRELSNG YSHRRDSPRP PPRRRPSEGR TEDREPGEVS GGSGSERSGE
110 120 130 140 150
RPMKTGEPRE NGVTRVSKEE AKMSPSKKRK QSPVIWDRNG SKRQARDPVR
160 170 180 190 200
GIREVDAVVA EIIMHQSHSL PVMSSLSSIG DGHSPMILDV SVDKVQEYEK
210 220 230 240 250
NRIVDEEEEG YPTMRNILTS RWADAGDEEE NVFVPKKKKS VSPVDSIERG
260 270 280 290 300
STKKVTSPES GEVLVYNSVR SSSRSSDSGV LQGSANRDLE VEKGDNIDVE
310 320 330 340 350
EAADDDYPAG HLLDSDFEGE DCRSETPECT RSPRRCINML QGCRSVDEFE
360 370 380 390 400
RLNTINEGTY GVVFRVRDKR TGEIVALKKV KMEKEREGFP LTSLREMNIL
410 420 430 440 450
LSFHHPSIVE VKEVVVGSND RDIFMVMEYM EHDLKGVMET MKQPYSQSEV
460 470 480 490 500
KCLMLQLLEG VKYLHDNWVL HRDLKTSNLL LNNRGELKIC DFGLSRQYGS
510 520 530 540 550
PLKPYTQLVV TLWYRAPELL LGAKDYSTAI DMWSLGCIMG ELLSKGPLFN
560 570 580 590 600
GKSEIDQLDK IFRTLGTPDE NIWPGYSKLP GATVKFGKQT HNRLRDKFRA
610 620 630 640 650
VSFTGGPMLS EAGFDLLNRL LTYDPEKRIS AEDALNHEWF RELPLPRSKD
660 670 680 690
FMPTFPALNE QDRRFKKHMK SPDPLEEQRM KEQGNNGDRG LFG
Length:693
Mass (Da):78,720
Last modified:July 5, 2004 - v1
Checksum:iE6AB21552A7826A6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP004124 Genomic DNA. Translation: BAD19341.1.
AP005385 Genomic DNA. Translation: BAD22167.1.
AP008208 Genomic DNA. Translation: BAF09269.1.
AK111593 mRNA. No translation available.
RefSeqiNP_001047355.1. NM_001053890.1.
UniGeneiOs.11889.

Genome annotation databases

EnsemblPlantsiOS02T0602100-02; OS02T0602100-02; OS02G0602100.
GeneIDi4329899.
KEGGiosa:4329899.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP004124 Genomic DNA. Translation: BAD19341.1 .
AP005385 Genomic DNA. Translation: BAD22167.1 .
AP008208 Genomic DNA. Translation: BAF09269.1 .
AK111593 mRNA. No translation available.
RefSeqi NP_001047355.1. NM_001053890.1.
UniGenei Os.11889.

3D structure databases

ProteinModelPortali Q6K5F8.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS02T0602100-02 ; OS02T0602100-02 ; OS02G0602100 .
GeneIDi 4329899.
KEGGi osa:4329899.

Organism-specific databases

Gramenei Q6K5F8.

Phylogenomic databases

eggNOGi COG0515.
InParanoidi Q6K5F8.
KOi K08818.
OMAi TMKQPYS.

Gene expression databases

ExpressionAtlasi Q6K5F8. baseline.

Family and domain databases

InterProi IPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_dom.
IPR002290. Ser/Thr_dual-sp_kinase.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view ]
Pfami PF00069. Pkinase. 1 hit.
[Graphical view ]
SMARTi SM00220. S_TKc. 1 hit.
[Graphical view ]
SUPFAMi SSF56112. SSF56112. 1 hit.
PROSITEi PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  4. "Genome-wide identification and expression analysis of rice cell cycle genes."
    Guo J., Song J., Wang F., Zhang X.S.
    Plant Mol. Biol. 64:349-360(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: INDUCTION, GENE FAMILY.

Entry informationi

Entry nameiCDKG1_ORYSJ
AccessioniPrimary (citable) accession number: Q6K5F8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 24, 2007
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 83 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3