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Protein
Submitted name:

Os09g0258600 protein

Gene

Os09g0258600

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
Os09g0258600 proteinImported
Submitted name:
Putative ribosomal protein L17Imported
Submitted name:
Uncharacterized proteinImported
Submitted name:
cDNA clone:001-047-A12, full insert sequenceImported
Submitted name:
cDNA clone:J013048E22, full insert sequenceImported
Submitted name:
cDNA clone:J023134I03, full insert sequenceImported
Gene namesi
Name:Os09g0258600Imported
Ordered Locus Names:Os09g0258600Imported
ORF Names:B1279D09.8Imported, OsJ_28568Imported, OSNPB_090258600Imported, P0523B07.46Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 9

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os09g08430.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L22P family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3353. Eukaryota.
COG0091. LUCA.
KOiK02880.
OMAiMHIRKAN.
OrthoDBiEOG09360PMK.

Family and domain databases

CDDicd00336. Ribosomal_L22. 1 hit.
Gene3Di3.90.470.10. 1 hit.
HAMAPiMF_01331_A. Ribosomal_L22_A. 1 hit.
InterProiIPR001063. Ribosomal_L22.
IPR018260. Ribosomal_L22/L17_CS.
IPR005721. Ribosomal_L22/L17_euk/arc.
[Graphical view]
PANTHERiPTHR11593. PTHR11593. 1 hit.
PfamiPF00237. Ribosomal_L22. 1 hit.
[Graphical view]
SUPFAMiSSF54843. SSF54843. 1 hit.
TIGRFAMsiTIGR01038. uL22_arch_euk. 1 hit.
PROSITEiPS00464. RIBOSOMAL_L22. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6K1W6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVKYSREANN PTKSSKAMGR DLRVHFKNTR ETAFAIRKLP LGKAKRYLED
60 70 80 90 100
VIAHKQAIPF RRYCGGVGRT AQAKSRHSNG QGRWPAKSAR FILDLLKNAE
110 120 130 140 150
SNAEVKGLDV DTLYVSHIQV NQAQKQRRRT YRAHGRINPY MSSPCHIELI
160 170
LSEKEEPVKK EPESQIAARK A
Length:171
Mass (Da):19,495
Last modified:July 5, 2004 - v1
Checksum:i7AD3CA160803C1E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005589 Genomic DNA. Translation: BAD23438.1.
AP006441 Genomic DNA. Translation: BAD23752.1.
AP008215 Genomic DNA. Translation: BAF24615.1.
AK072488 mRNA. Translation: BAG92993.1.
AK105087 mRNA. Translation: BAG97091.1.
AK120273 mRNA. Translation: BAG99945.1.
AP014965 Genomic DNA. Translation: BAT07094.1.
CM000146 Genomic DNA. Translation: EAZ43948.1.
RefSeqiXP_015612256.1. XM_015756770.1.
UniGeneiOs.9941.

Genome annotation databases

EnsemblPlantsiOS09T0258600-01; OS09T0258600-01; OS09G0258600.
GeneIDi4346540.
GrameneiOS09T0258600-01; OS09T0258600-01; OS09G0258600.
KEGGiosa:4346540.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005589 Genomic DNA. Translation: BAD23438.1.
AP006441 Genomic DNA. Translation: BAD23752.1.
AP008215 Genomic DNA. Translation: BAF24615.1.
AK072488 mRNA. Translation: BAG92993.1.
AK105087 mRNA. Translation: BAG97091.1.
AK120273 mRNA. Translation: BAG99945.1.
AP014965 Genomic DNA. Translation: BAT07094.1.
CM000146 Genomic DNA. Translation: EAZ43948.1.
RefSeqiXP_015612256.1. XM_015756770.1.
UniGeneiOs.9941.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os09g08430.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS09T0258600-01; OS09T0258600-01; OS09G0258600.
GeneIDi4346540.
GrameneiOS09T0258600-01; OS09T0258600-01; OS09G0258600.
KEGGiosa:4346540.

Phylogenomic databases

eggNOGiKOG3353. Eukaryota.
COG0091. LUCA.
KOiK02880.
OMAiMHIRKAN.
OrthoDBiEOG09360PMK.

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

CDDicd00336. Ribosomal_L22. 1 hit.
Gene3Di3.90.470.10. 1 hit.
HAMAPiMF_01331_A. Ribosomal_L22_A. 1 hit.
InterProiIPR001063. Ribosomal_L22.
IPR018260. Ribosomal_L22/L17_CS.
IPR005721. Ribosomal_L22/L17_euk/arc.
[Graphical view]
PANTHERiPTHR11593. PTHR11593. 1 hit.
PfamiPF00237. Ribosomal_L22. 1 hit.
[Graphical view]
SUPFAMiSSF54843. SSF54843. 1 hit.
TIGRFAMsiTIGR01038. uL22_arch_euk. 1 hit.
PROSITEiPS00464. RIBOSOMAL_L22. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6K1W6_ORYSJ
AccessioniPrimary (citable) accession number: Q6K1W6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 5, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.