Q6K1Q6 (Q6K1Q6_ORYSJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative hydroxyproline-rich glycoprotein 1 EMBL BAD22517.1

Submitted name:
Ribosomal protein L14 EMBL BAG68299.1

Gene names

Name:	OSJNOa283G08.1 EMBL BAD22517.1
Synonyms:	OJ1234_B11.29 EMBL BAD21553.1, OsRPL14 EMBL BAG68299.1

Organism

Oryza sativa subsp. japonica (Rice) [Reference proteome]

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › Liliopsida › commelinids › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › Oryza sativa

Protein attributes

Sequence length	134 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL BAG68299.1
Technical term	3D-structure PDB 3IZR Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	chloroplast Inferred from electronic annotation. Source: EnsemblPlants/Gramene cytosolic large ribosomal subunit Inferred from electronic annotation. Source: EnsemblPlants/Gramene endoplasmic reticulum Inferred from electronic annotation. Source: EnsemblPlants/Gramene nucleolus Inferred from electronic annotation. Source: EnsemblPlants/Gramene plasma membrane Inferred from electronic annotation. Source: EnsemblPlants/Gramene vacuole Inferred from electronic annotation. Source: EnsemblPlants/Gramene
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6K1Q6 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: E5D0A1C276F716DF	FASTA	134	15,387
	10 20 30 40 50 60 MPFKRFVEIG RVALVNYGKD YGRLVVIVDV VDQNRALVDA PDMVRCQINF KRLSLTDIKI 70 80 90 100 110 120 DIKRVPKKTT LIKAMEEADV KNKWENSSWG KKLIVQKRRA SLNDFDRFKV MLAKIKRGGA 130 IRQELAKLKK TAAA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2, BAC clone:OJ1234_B11." Sasaki T., Matsumoto T., Yamamoto K. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2, fosmid clone:OSJNOa283G08." Sasaki T., Matsumoto T., Fujisawa M. Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[4]	"The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.
[5]	Xu Z. Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[6]	"Cloning and Expression Analysis of a Ribosomal Glycoprotein OsRPL14 from Rice." Zhiru D., Jiang X., Jia W., Bin J., Yongju X., Qi Z., Zhengjun X. Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[7]	"Localization of eukaryote-specific ribosomal proteins in a 5.5-A cryo-EM map of the 80S eukaryotic ribosome." Armache J.P., Jarasch A., Anger A.M., Villa E., Becker T., Bhushan S., Jossinet F., Habeck M., Dindar G., Franckenberg S., Marquez V., Mielke T., Thomm M., Berninghausen O., Beatrix B., Soding J., Westhof E., Wilson D.N., Beckmann R. Proc. Natl. Acad. Sci. U.S.A. 107:19754-19759(2010) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.50 ANGSTROMS).
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AP004053 Genomic DNA. Translation: BAD21553.1.
AP006846 Genomic DNA. Translation: BAD22517.1.
AB378378 mRNA. Translation: BAG68299.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3IZR	electron microscopy	5.50	N	1-134	[»]

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblPlants

LOC_Os02g40880.1; LOC_Os02g40880.1; LOC_Os02g40880.

Phylogenomic databases

OMA

SWAKKIE.

Family and domain databases

Gene3D

2.30.30.30. 1 hit.

InterPro

IPR014722. Rib_L2_dom2.
IPR002784. Ribosomal_L14.
[Graphical view]

Pfam

PF01929. Ribosomal_L14e. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q6K1Q6_ORYSJ

Accession

Primary (citable) accession number: Q6K1Q6

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	April 3, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)