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Protein
Submitted name:

Os02g0622300 protein

Gene

Os02g0622300

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
Os02g0622300 proteinImported
Submitted name:
Putative hydroxyproline-rich glycoprotein 1Imported
Submitted name:
Ribosomal protein L14Imported
Gene namesi
Name:Os02g0622300Imported
Synonyms:OsRPL14Imported
ORF Names:OJ1234_B11.29Imported, OSJNOa283G08.1Imported, OSNPB_020622300Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 2, cultivar: Nipponbare

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g40880.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini45 – 11773Ribosomal_L14eInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG3421. Eukaryota.
COG2163. LUCA.
OMAiSWAKKIE.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR014722. Rib_L2_dom2.
IPR002784. Ribosomal_L14e_dom.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PfamiPF01929. Ribosomal_L14e. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6K1Q6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPFKRFVEIG RVALVNYGKD YGRLVVIVDV VDQNRALVDA PDMVRCQINF
60 70 80 90 100
KRLSLTDIKI DIKRVPKKTT LIKAMEEADV KNKWENSSWG KKLIVQKRRA
110 120 130
SLNDFDRFKV MLAKIKRGGA IRQELAKLKK TAAA
Length:134
Mass (Da):15,387
Last modified:July 5, 2004 - v1
Checksum:iE5D0A1C276F716DF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004053 Genomic DNA. Translation: BAD21553.1.
AP006846 Genomic DNA. Translation: BAD22517.1.
AB378378 mRNA. Translation: BAG68299.1.
AP014958 Genomic DNA. Translation: BAS79833.1.
RefSeqiXP_015622875.1. XM_015767389.1.

Genome annotation databases

EnsemblPlantsiOS02T0622300-00; OS02T0622300-00; OS02G0622300.
GeneIDi4330020.
GrameneiOS02T0622300-00; OS02T0622300-00; OS02G0622300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004053 Genomic DNA. Translation: BAD21553.1.
AP006846 Genomic DNA. Translation: BAD22517.1.
AB378378 mRNA. Translation: BAG68299.1.
AP014958 Genomic DNA. Translation: BAS79833.1.
RefSeqiXP_015622875.1. XM_015767389.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os02g40880.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS02T0622300-00; OS02T0622300-00; OS02G0622300.
GeneIDi4330020.
GrameneiOS02T0622300-00; OS02T0622300-00; OS02G0622300.

Phylogenomic databases

eggNOGiKOG3421. Eukaryota.
COG2163. LUCA.
OMAiSWAKKIE.

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR014722. Rib_L2_dom2.
IPR002784. Ribosomal_L14e_dom.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PfamiPF01929. Ribosomal_L14e. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2, BAC clone:OJ1234_B11."
    Sasaki T., Matsumoto T., Yamamoto K.
    Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 2, fosmid clone:OSJNOa283G08."
    Sasaki T., Matsumoto T., Fujisawa M.
    Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NipponbareImported.
  4. Xu Z.
    Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  5. "Cloning and Expression Analysis of a Ribosomal Glycoprotein OsRPL14 from Rice."
    Zhiru D., Jiang X., Jia W., Bin J., Yongju X., Qi Z., Zhengjun X.
    Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  6. "Rice Annotation Project Database (RAP-DB): an integrative and interactive database for rice genomics."
    Sakai H., Lee S.S., Tanaka T., Numa H., Kim J., Kawahara Y., Wakimoto H., Yang C.C., Iwamoto M., Abe T., Yamada Y., Muto A., Inokuchi H., Ikemura T., Matsumoto T., Sasaki T., Itoh T.
    Plant Cell Physiol. 54:E6-E6(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  7. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. NipponbareImported.
  8. Millard Andrew
    Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ6K1Q6_ORYSJ
AccessioniPrimary (citable) accession number: Q6K1Q6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 11, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.