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Q6JBI7

- Q6JBI7_RAT

UniProt

Q6JBI7 - Q6JBI7_RAT

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Protein
Submitted name:

LMO7a

Gene
Lmo7, LMO7
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. actinin binding Source: RGD
  2. protein binding Source: RGD
  3. protein C-terminus binding Source: RGD
  4. zinc ion binding Source: InterPro

GO - Biological processi

  1. single organismal cell-cell adhesion Source: RGD
Complete GO annotation...

Keywords - Ligandi

Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
LMO7aImported
Gene namesi
Name:Lmo7Imported
Synonyms:LMO7Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1302984. Lmo7.

Subcellular locationi

GO - Cellular componenti

  1. apical plasma membrane Source: RGD
  2. cell-cell adherens junction Source: RGD
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ6JBI7.

PTM databases

PhosphoSiteiQ6JBI7.

Expressioni

Gene expression databases

GenevestigatoriQ6JBI7.

Structurei

3D structure databases

ProteinModelPortaliQ6JBI7.
SMRiQ6JBI7. Positions 1064-1152.

Family & Domainsi

Sequence similaritiesi

Contains 1 PDZ (DHR) domain.UniRule annotation

Keywords - Domaini

LIM domainUniRule annotationSAAS annotations

Phylogenomic databases

HOGENOMiHOG000043081.
HOVERGENiHBG049143.
InParanoidiQ6JBI7.
KOiK06084.
PhylomeDBiQ6JBI7.

Family and domain databases

Gene3Di1.10.418.10. 1 hit.
2.10.110.10. 1 hit.
2.30.42.10. 1 hit.
InterProiIPR001715. CH-domain.
IPR001478. PDZ.
IPR003096. SM22_calponin.
IPR001781. Znf_LIM.
[Graphical view]
PfamiPF00307. CH. 1 hit.
PF00412. LIM. 1 hit.
PF00595. PDZ. 1 hit.
[Graphical view]
PRINTSiPR00888. SM22CALPONIN.
SMARTiSM00033. CH. 1 hit.
SM00132. LIM. 1 hit.
SM00228. PDZ. 1 hit.
[Graphical view]
SUPFAMiSSF47576. SSF47576. 1 hit.
SSF50156. SSF50156. 1 hit.
PROSITEiPS50021. CH. 1 hit.
PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 1 hit.
PS50106. PDZ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6JBI7-1 [UniParc]FASTAAdd to Basket

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MEGMEDAEAD CSIAFAEAQR WVEAVTEKNF ETRDFRASLE NGVLLCDLIN     50
KLKPGVVRKI NRLSTPIAGL DNINVFLKAC EQIGLKEAQL FHPGDLQDLS 100
NRVTVKQEET DRRLKNVLIT LYWLGRKAQN NPYYHGPYLN LKAFETLLGQ 150
ALTKALEDSS CLKRSGRDSG YGDIWCPDRG DFPAPPGSHR REDSFESLDS 200
LGSRSLTSCS SDLTLRGGRE GCESDNDWEF TFKMQDYNKD DMSYRRISAI 250
EPKSALPFNR FLPNKSKQPS YVPAPLRKKR PDKNEDNRRS WASPVYTETE 300
GTFSSTQRRA WGPKMENWHT VQETSTSSWC LEEEEEKVTR LPNVVKDDLY 350
VRKLSPVMPS PGSSFDQFLP KGWTPEDMNW KKIKRETYKP WYKEFQGLSQ 400
FLLLQALQTY SDDILSSETN VKLDPTSGPR LITRRKNFSP TPGYRAHDLE 450
PQSLDPDLEN DDFFVRKTRA FHANPCVLRA FEDFRRFSEP DDAVERDIIL 500
QCREGELVLP DLEKDDMIVR RIPAQKKEVP LSGAPDRYQP VPFPEPWTLP 550
PEIQAKFLSV LERTCPPKDK PSSCRVLVPS HRLKKDDMLT RKIQSWKLGT 600
AVPPISFRPG PCSEADLRKW EAIREASRLR HRKRLMVERL FQKIYGENGS 650
KSLSDVSAED VQSLRQLRYE EMQKIKSQLK EQDQKWQDDL AKWKDRRKSY 700
TSDLQKKKEE REEIEKQALE KSDRSSKTFR EMLQDRESQS STTTSRRRIY 750
SSDDILDDGV LPPTVTLSET SYQSERLEDK ARAHPAEMPK EDSTTFASRE 800
DGIAAEIPLA SHIPEERRQA PWPSAETRQA SSSSAESHQA SLPSTESDQA 850
RLPSAEPHQA SFSSAEPRQV PLVSAEPHQA SSFSSTEPHQ ASLSSALQRP 900
SSLSSSQQSW STRGESTRIS ASLPRSYQRS DTARLTSVVT ARPFGTSSRG 950
ISSLPRSYTM DDGWIYNGDV EVVKREQHDS GRAAGMKPDS SHFILGSSSE 1000
KEVATGEDGA SLSSFVLPSS SSLSHDQAAS SKATFSSTSG LDSVSDSGEG 1050
RSSSLREVSR SPDQFSDMRI SINQTPGTKH DFGFTIKWDV SGISVASVEK 1100
GSPAEFSQLQ VDDEILAINN TKFSYKDTKK WEEAMANAQE TGNLVMDVRR 1150
YGKSGSPETK WIDTTSGIYS TEKSSSLSVT TDFSESLQSP YSESKEINGI 1200
HEGSNAFDSK ASESISLKNL KRRSQFFEQG SSDSVAPDLP VPTLSAPSRW 1250
AWDQEEERRR QERWQKEQDR LLQEKYQREQ EKLREEWQRA QQEAERENSK 1300
YLDEELMVLN SNSISLTSRE SVTASWEPSW SEGSKSLDRE GTRAGDEDRG 1350
QLEDDAVYED QSQKLQERLM LEHEKKRKEQ EAQEEELRKQ REAEAQARAE 1400
AEAQARAEAQ ARAEAQAQAE AEARKRAEAQ KLQAERERET SVKIYQYRRP 1450
IDSYDLPKRE EESSGLLPID RSKSRSTTEL NDPLIEKSGS SKYSDRIGTT 1500
SFSQRSSKKD QGPSEAELER QQILQEMRKK TSLHNDNSWI RQRSASVNKE 1550
PICLTGIMRR GESLDNLDSQ RPGSWRQSSW HSQPAGVYAS SSVQDFSRLP 1600
PQLLSTSNRA YMRNPSSAVP PLAGSVKTSP GSPSPRSHSP SMSQSGSQLR 1650
NRSVSGKRVC SYCNSILGKG AAMIIETLGL CYHLHCFKCV SCERDLGGSS 1700
SGAEVRIRNH QLYCNDCYLR FKSGRPTAM 1729
Length:1,729
Mass (Da):195,571
Last modified:July 5, 2004 - v1
Checksum:i7237E98173E2237A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY533473 mRNA. Translation: AAT02180.1.
RefSeqiNP_001001515.1. NM_001001515.1.
UniGeneiRn.98417.

Genome annotation databases

GeneIDi361084.
KEGGirno:361084.
UCSCiRGD:1302984. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY533473 mRNA. Translation: AAT02180.1 .
RefSeqi NP_001001515.1. NM_001001515.1.
UniGenei Rn.98417.

3D structure databases

ProteinModelPortali Q6JBI7.
SMRi Q6JBI7. Positions 1064-1152.
ModBasei Search...
MobiDBi Search...

PTM databases

PhosphoSitei Q6JBI7.

Proteomic databases

PRIDEi Q6JBI7.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 361084.
KEGGi rno:361084.
UCSCi RGD:1302984. rat.

Organism-specific databases

CTDi 4008.
RGDi 1302984. Lmo7.

Phylogenomic databases

HOGENOMi HOG000043081.
HOVERGENi HBG049143.
InParanoidi Q6JBI7.
KOi K06084.
PhylomeDBi Q6JBI7.

Miscellaneous databases

NextBioi 675156.

Gene expression databases

Genevestigatori Q6JBI7.

Family and domain databases

Gene3Di 1.10.418.10. 1 hit.
2.10.110.10. 1 hit.
2.30.42.10. 1 hit.
InterProi IPR001715. CH-domain.
IPR001478. PDZ.
IPR003096. SM22_calponin.
IPR001781. Znf_LIM.
[Graphical view ]
Pfami PF00307. CH. 1 hit.
PF00412. LIM. 1 hit.
PF00595. PDZ. 1 hit.
[Graphical view ]
PRINTSi PR00888. SM22CALPONIN.
SMARTi SM00033. CH. 1 hit.
SM00132. LIM. 1 hit.
SM00228. PDZ. 1 hit.
[Graphical view ]
SUPFAMi SSF47576. SSF47576. 1 hit.
SSF50156. SSF50156. 1 hit.
PROSITEi PS50021. CH. 1 hit.
PS00478. LIM_DOMAIN_1. 1 hit.
PS50023. LIM_DOMAIN_2. 1 hit.
PS50106. PDZ. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Involvement of LMO7 in the association of two cell-cell adhesion molecules, nectin and E-cadherin, through afadin and alpha-actinin in epithelial cells."
    Ooshio T., Irie K., Morimoto K., Fukuhara A., Imai T., Takai Y.
    J. Biol. Chem. 279:31365-31373(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague-DawleyImported.

Entry informationi

Entry nameiQ6JBI7_RAT
AccessioniPrimary (citable) accession number: Q6JBI7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: July 9, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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