Q6J614 (Q6J614_CHICK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Invariant chain EMBL AAT36345.1

Gene names

Name:

Ii EMBL AAT36345.1

Organism

Gallus gallus (Chicken) EMBL AAT36345.1

Taxonomic identifier

9031 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Sauropsida › Sauria › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Galliformes › Phasianidae › Phasianinae › Gallus

Protein attributes

Sequence length	223 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	antigen processing and presentation Inferred from electronic annotation. Source: InterPro immune response Inferred from electronic annotation. Source: InterPro intracellular protein transport Inferred from electronic annotation. Source: InterPro
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6J614 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: BBB1C1D2A351715D	FASTA	223	24,813
	10 20 30 40 50 60 MAEEQRDLIS SDGSSGVLPI GNSERSSLGR RTALSALSIL VALLIAGQAV TIYYVYQQSG 70 80 90 100 110 120 QISKLTKTSQ TLKLESLQRK MPIGTQPANK MSMSTMNMPM AMKVLPLAPS VGDMPMEAME 130 140 150 160 170 180 PRSNKTEDQI RHLLLKSDPR KTFPDLKDDM LGNLKRLKKT MSAMDWQDFE TWMHKWLLFE 190 200 210 220 MAKGPKMEEQ NTIPAEKAPA PTQPPSAEPE EVIFSGVDMV KAK

References

[1]	"Molecular cloning and expression of two chicken invariant chain isoforms produced by alternative splicing." Zhong D., Yu W., Liu Y., Liu J., Li J. Immunogenetics 56:650-656(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY597053 mRNA. Translation: AAT36345.1.
IPI	IPI00586906.
UniGene	Gga.4414.
3D structure databases
ProteinModelPortal	Q6J614.
ModBase	Search...
Protein-protein interaction databases
STRING	9031.ENSGALP00000007299. Q6J614.
Proteomic databases
PRIDE	Q6J614.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Phylogenomic databases
HOGENOM	HOG000013145.
HOVERGEN	HBG004444.
Family and domain databases
Gene3D	1.10.870.10. 1 hit.
InterPro	IPR015386. MHC_II-assoc_invar/CLIP_MHC-bd. IPR022339. MHC_II-assoc_invar_chain. IPR011988. MHC_II-assoc_invariant_trimer. [Graphical view]
PANTHER	PTHR14093. PTHR14093. 1 hit.
Pfam	PF09307. MHC2-interact. 1 hit. PF08831. MHCassoc_trimer. 1 hit. [Graphical view]
PIRSF	PIRSF001992. CD74_antigen. 1 hit.
PRINTS	PR01990. CD74ANTIGEN.
SUPFAM	SSF48305. MHC_II-assoc_invariant_trimer. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6J614_CHICK

Accession

Primary (citable) accession number: Q6J614

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	April 3, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)