Q6IWJ1 (Q6IWJ1_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cellular retinoic acid binding protein 1b EMBL AAI62180.1

Submitted name:
Cellular retinoic acid-binding protein type I EMBL AAT38218.1
Submitted name:
Uncharacterized protein Ensembl ENSDARP00000052121

Gene names

Name:

crabp1b Ensembl ENSDARP00000052121 ZFIN ZDB-GENE-040624-3 EMBL AAT38218.1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome]

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	137 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. RuleBase RU003696

Ontologies

Keywords
Biological process	Transport SAAS SAAS011038 RuleBase RU003696
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	lipid binding Inferred from electronic annotation. Source: InterPro transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6IWJ1 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: BF86EF8EFC352C8E	FASTA	137	15,726
	10 20 30 40 50 60 MPNFAGTWKM KSSENFEELL KALGVNAMLR KVACAAASKP HVEIRQNGEQ FYIKTSTTVR 70 80 90 100 110 120 TTEINFQIGQ EFYEETVDGR KCKSLATWET ENKMTCRQTL LDGNGPKTYW TRELRGNELI 130 LMFGADDVVC TRIYVRE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Retention of the duplicated cellular retinoic acid-binding protein 1 genes (crabp1a and crabp1b) in the zebrafish genome by subfunctionalization of tissue-specific expression." Liu R.Z., Sharma M.K., Sun Q., Thisse C., Thisse B., Denovan-Wright E.M., Wright J.M. FEBS J. 272:3561-3571(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
[3]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000052121.
[4]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000052121.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX663612 Genomic DNA. No translation available. BC162180 mRNA. Translation: AAI62180.1. BC162190 mRNA. Translation: AAI62190.1. AY616861 mRNA. Translation: AAT38218.1.
IPI	IPI00497860.
RefSeq	NP_001001842.1. NM_001001842.1.
UniGene	Dr.88282.
3D structure databases
SMR	Q6IWJ1. Positions 2-137.
ModBase	Search...
Protein-protein interaction databases
STRING	7955.ENSDARP00000052121.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000052122; ENSDARP00000052121; ENSDARG00000035904.
GeneID	415102.
KEGG	dre:415102.
Organism-specific databases
CTD	415102.
ZFIN	ZDB-GENE-040624-3. crabp1b.
Phylogenomic databases
eggNOG	NOG258792.
GeneTree	ENSGT00560000076799.
HOGENOM	HOG000004831.
HOVERGEN	HBG005633.
InParanoid	Q6IWJ1.
OMA	TFWSREL.
OrthoDB	EOG4KPTC5.
Family and domain databases
Gene3D	2.40.128.20. 1 hit.
InterPro	IPR012674. Calycin. IPR011038. Calycin-like. IPR000463. Fatty_acid-bd. IPR000566. Lipocln_cytosolic_FA-bd_dom. [Graphical view]
Pfam	PF00061. Lipocalin. 1 hit. [Graphical view]
PRINTS	PR00178. FATTYACIDBP.
SUPFAM	SSF50814. Calycin. 1 hit.
PROSITE	PS00214. FABP. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20818787.

Entry information

Entry name

Q6IWJ1_DANRE

Accession

Primary (citable) accession number: Q6IWJ1

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	May 29, 2013
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)