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Q6IU14

- Q6IU14_RAT

UniProt

Q6IU14 - Q6IU14_RAT

Protein
Submitted name:

Acyl-CoA synthetase isoform 6 variant2

Gene

Acsl6

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Acyl-CoA synthetase isoform 6 variant2Imported
    Gene namesi
    Name:Acsl6Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi69403. Acsl6.

    PTM / Processingi

    Proteomic databases

    PRIDEiQ6IU14.

    Expressioni

    Gene expression databases

    GenevestigatoriQ6IU14.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000046170.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6IU14.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000159459.
    HOVERGENiHBG050452.
    KOiK01897.

    Family and domain databases

    InterProiIPR020845. AMP-binding_CS.
    IPR000873. AMP-dep_Synth/Lig.
    [Graphical view]
    PfamiPF00501. AMP-binding. 1 hit.
    [Graphical view]
    PROSITEiPS00455. AMP_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6IU14-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQTQEILRIL RLPELSDLGQ FFRSLSATTL VSMGALAAIL AYWLTHRPKA    50
    LQPPCNLLMQ SEEVEDSGGA RRSVIGDCTQ LLTHYYDDAR TMYQVFRRGL 100
    SISGNGPCLG FRKPEQPYQW LSYQEVAKRA EFLGSGLLQH DCKVGTEQFI 150
    GVFAQNRPEW IIAELACYTY SMVVVPLYDT LGPGSIRYII NTADICTVIV 200
    DKPHKAILLL EHVERKETPG LKLVILMEPF DDALRERGKK CGVDIKSMQA 250
    IEDSGQENHR VPVPPRPDDL SIVCFTSGTT GNPKGAMLTH GNVVADFSGF 300
    LKVTEKVIFP RQDDVLISFL PLAHMFERVI QSVVYCHGGR VGFFQGDIRL 350
    LSDDMKALRP TIFPVVPRLL NRMYDKIFHQ ADTSLKRWLL EFAAKRKQAE 400
    VRSGIIRNNS IWDELFFNKI QASLGGHVRM IVTGAAPASP TVLGFLRAAL 450
    GCQVYEGYGQ TECTAGCTFT TPGDWTSGHV GAPLPCNHIK LVDAEELNYW 500
    TSKGEGEICV KGPNVFKGYL KDEDRTKEAL DSDGWLHTGD IGKWLPEGTL 550
    KIIDRKKHIF KLAQGEYVAP EKIENIYIRS EPVAQIYVHG DSLKAFLVGI 600
    VVPDPEVMPC WAQKKGIEGN YQELCKSKEL KKAILDDMVM LGKESGLHSF 650
    EQVKAIYIHC DMFSVQNGLL TPTLKAKRPE LREYFKKQIE ELYSISM 697
    Length:697
    Mass (Da):78,227
    Last modified:July 5, 2004 - v1
    Checksum:i521753E09FB712FC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY625254 mRNA. Translation: AAT41589.1.
    RefSeqiXP_006246285.1. XM_006246223.1.
    XP_006246286.1. XM_006246224.1.
    UniGeneiRn.33697.

    Genome annotation databases

    GeneIDi117243.
    KEGGirno:117243.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY625254 mRNA. Translation: AAT41589.1 .
    RefSeqi XP_006246285.1. XM_006246223.1.
    XP_006246286.1. XM_006246224.1.
    UniGenei Rn.33697.

    3D structure databases

    ProteinModelPortali Q6IU14.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000046170.

    Proteomic databases

    PRIDEi Q6IU14.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 117243.
    KEGGi rno:117243.

    Organism-specific databases

    CTDi 23305.
    RGDi 69403. Acsl6.

    Phylogenomic databases

    HOGENOMi HOG000159459.
    HOVERGENi HBG050452.
    KOi K01897.

    Gene expression databases

    Genevestigatori Q6IU14.

    Family and domain databases

    InterProi IPR020845. AMP-binding_CS.
    IPR000873. AMP-dep_Synth/Lig.
    [Graphical view ]
    Pfami PF00501. AMP-binding. 1 hit.
    [Graphical view ]
    PROSITEi PS00455. AMP_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Characterization of recombinant long-chain rat acyl-CoA synthetase isoforms 3 and 6: identification of a novel variant of isoform 6."
      Van Horn C.G., Caviglia J.M., Li L.O., Wang S., Granger D.A., Coleman R.A.
      Biochemistry 44:1635-1642(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Sprague-DawleyImported.
      Tissue: BrainImported.

    Entry informationi

    Entry nameiQ6IU14_RAT
    AccessioniPrimary (citable) accession number: Q6IU14
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)