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Q6IU14

- Q6IU14_RAT

UniProt

Q6IU14 - Q6IU14_RAT

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Protein
Submitted name:

Acyl-CoA synthetase isoform 6 variant2

Gene

Acsl6

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Acyl-CoA synthetase isoform 6 variant2Imported
Gene namesi
Name:Acsl6Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi69403. Acsl6.

PTM / Processingi

Proteomic databases

PRIDEiQ6IU14.

Expressioni

Gene expression databases

GenevestigatoriQ6IU14.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000046170.

Structurei

3D structure databases

ProteinModelPortaliQ6IU14.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000159459.
HOVERGENiHBG050452.
KOiK01897.

Family and domain databases

InterProiIPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6IU14-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQTQEILRIL RLPELSDLGQ FFRSLSATTL VSMGALAAIL AYWLTHRPKA
60 70 80 90 100
LQPPCNLLMQ SEEVEDSGGA RRSVIGDCTQ LLTHYYDDAR TMYQVFRRGL
110 120 130 140 150
SISGNGPCLG FRKPEQPYQW LSYQEVAKRA EFLGSGLLQH DCKVGTEQFI
160 170 180 190 200
GVFAQNRPEW IIAELACYTY SMVVVPLYDT LGPGSIRYII NTADICTVIV
210 220 230 240 250
DKPHKAILLL EHVERKETPG LKLVILMEPF DDALRERGKK CGVDIKSMQA
260 270 280 290 300
IEDSGQENHR VPVPPRPDDL SIVCFTSGTT GNPKGAMLTH GNVVADFSGF
310 320 330 340 350
LKVTEKVIFP RQDDVLISFL PLAHMFERVI QSVVYCHGGR VGFFQGDIRL
360 370 380 390 400
LSDDMKALRP TIFPVVPRLL NRMYDKIFHQ ADTSLKRWLL EFAAKRKQAE
410 420 430 440 450
VRSGIIRNNS IWDELFFNKI QASLGGHVRM IVTGAAPASP TVLGFLRAAL
460 470 480 490 500
GCQVYEGYGQ TECTAGCTFT TPGDWTSGHV GAPLPCNHIK LVDAEELNYW
510 520 530 540 550
TSKGEGEICV KGPNVFKGYL KDEDRTKEAL DSDGWLHTGD IGKWLPEGTL
560 570 580 590 600
KIIDRKKHIF KLAQGEYVAP EKIENIYIRS EPVAQIYVHG DSLKAFLVGI
610 620 630 640 650
VVPDPEVMPC WAQKKGIEGN YQELCKSKEL KKAILDDMVM LGKESGLHSF
660 670 680 690
EQVKAIYIHC DMFSVQNGLL TPTLKAKRPE LREYFKKQIE ELYSISM
Length:697
Mass (Da):78,227
Last modified:July 5, 2004 - v1
Checksum:i521753E09FB712FC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY625254 mRNA. Translation: AAT41589.1.
RefSeqiXP_006246285.1. XM_006246223.2.
XP_006246286.1. XM_006246224.2.
UniGeneiRn.33697.

Genome annotation databases

GeneIDi117243.
KEGGirno:117243.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AY625254 mRNA. Translation: AAT41589.1 .
RefSeqi XP_006246285.1. XM_006246223.2.
XP_006246286.1. XM_006246224.2.
UniGenei Rn.33697.

3D structure databases

ProteinModelPortali Q6IU14.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000046170.

Proteomic databases

PRIDEi Q6IU14.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 117243.
KEGGi rno:117243.

Organism-specific databases

CTDi 23305.
RGDi 69403. Acsl6.

Phylogenomic databases

HOGENOMi HOG000159459.
HOVERGENi HBG050452.
KOi K01897.

Gene expression databases

Genevestigatori Q6IU14.

Family and domain databases

InterProi IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view ]
Pfami PF00501. AMP-binding. 1 hit.
[Graphical view ]
PROSITEi PS00455. AMP_BINDING. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Characterization of recombinant long-chain rat acyl-CoA synthetase isoforms 3 and 6: identification of a novel variant of isoform 6."
    Van Horn C.G., Caviglia J.M., Li L.O., Wang S., Granger D.A., Coleman R.A.
    Biochemistry 44:1635-1642(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague-DawleyImported.
    Tissue: BrainImported.

Entry informationi

Entry nameiQ6IU14_RAT
AccessioniPrimary (citable) accession number: Q6IU14
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)