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Protein
Submitted name:

MGC78846 protein

Gene

dgcr8

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
MGC78846 proteinImported
Gene namesi
Name:dgcr8Imported
Synonyms:MGC78846Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-976038. dgcr8.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4E5RX-ray1.90A300-355[»]
ProteinModelPortaliQ6IRB5.
SMRiQ6IRB5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini303 – 336WWInterPro annotationAdd BLAST34
Domaini510 – 577DRBMInterPro annotationAdd BLAST68

Phylogenomic databases

HOVERGENiHBG051344.
KOiK18419.

Family and domain databases

CDDicd00201. WW. 1 hit.
InterProiView protein in InterPro
IPR014720. dsRBD_dom.
IPR001202. WW_dom.
PfamiView protein in Pfam
PF00035. dsrm. 2 hits.
SMARTiView protein in SMART
SM00358. DSRM. 2 hits.
SM00456. WW. 1 hit.
SUPFAMiSSF51045. SSF51045. 1 hit.
PROSITEiView protein in PROSITE
PS50137. DS_RBD. 1 hit.
PS50020. WW_DOMAIN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6IRB5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEECEEVAPF PEVNGHDVTE MNPASPPPLP PEEEPPPPPL QTSSDAEVMD
60 70 80 90 100
VGSGGDGQSQ TPAGDLQQNN GLQLFTKGST SYKSHRTVLD PFHSDQSPRT
110 120 130 140 150
ARHAPSNKRF TPDLKLLKDV KVSVSFTESC RSKDRHVLYT GLECEGSLHG
160 170 180 190 200
GSNMNSVNGD MYVCPFAGSS NGNVTDSIEI TLKKNYEPEI EQEKKVEYAV
210 220 230 240 250
LDELEDFTEN VMDVDEDGAE FVSESILQRE KIDEEALIYS YEDEFDNDVD
260 270 280 290 300
ALLEESLHTP KKRRIDEKYD IDSDHQSDGE SSVQPMVTKI KTVLKSRGRP
310 320 330 340 350
PTEPLPDGWI MTFHNSGLPV YLHRETRVVT WSRPYFLGTG SIRKHDPPIS
360 370 380 390 400
SIPCLHYKKM KDNDIKEQSN DVTSALVSVS SSTKSSDTSH NSEEPDTTAA
410 420 430 440 450
DSFVSDERES VSEVAQGALG QVKAKVEVCK DESINLEDFR SYLEKRFDFE
460 470 480 490 500
QVTVKKFRTW AERRQFNREM KRKQAECERP ILPANQKLIT LSVQDAPTKK
510 520 530 540 550
EFVINPNGKS EVCILHEYMQ RVLKVRPVYN FFECENPSEP FGASVIINGV
560 570 580 590 600
TYGTGTASSK KLAKNKAARA TLEILIPDFV KQTCIEKPKD TDELEYFNHI
610 620 630 640 650
SIEDSRVYEL TNKAGLLSPY QILHECLKRN HGMGDTSIKF EVIPGKNQKS
660 670 680 690 700
EYVMTCGKHT VRGWCKNKRV GKQLASQKIL QLLHPHVKNW GSLLRMYGRE
710 720 730 740 750
NSKIVKQETA DKSVIELQQF AKKNKPNLHI LNKLQEEMRR LAQEREETRK
760 770
KPKMTIVESA QPGSEPLCTV DV
Length:772
Mass (Da):87,193
Last modified:July 5, 2004 - v1
Checksum:i4E80583B7E05BA29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC070985 mRNA. Translation: AAH70985.1.
RefSeqiNP_001085043.1. NM_001091574.1.
UniGeneiXl.19878.

Genome annotation databases

GeneIDi432110.
KEGGixla:432110.

Similar proteinsi

Entry informationi

Entry nameiQ6IRB5_XENLA
AccessioniPrimary (citable) accession number: Q6IRB5
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: September 27, 2017
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources