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Protein
Submitted name:

60S ribosomal protein L11

Gene

rpl11

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • apoptotic process Source: ZFIN
  • chordate embryonic development Source: ZFIN
  • erythrocyte development Source: ZFIN
  • erythrocyte differentiation Source: ZFIN
  • glucose homeostasis Source: ZFIN
  • hemoglobin biosynthetic process Source: ZFIN
  • hemopoiesis Source: ZFIN
  • ribosomal large subunit assembly Source: GO_Central
  • translation Source: GO_Central

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L11Imported
Submitted name:
Ribosomal protein L11Imported
Gene namesi
Name:rpl11Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 19

Organism-specific databases

ZFINiZDB-GENE-040625-147 rpl11

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSDARG00000043509

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000063869

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 63Ribosomal_L5InterPro annotationAdd BLAST54
Domaini67 – 165Ribosomal_L5_CInterPro annotationAdd BLAST99

Sequence similaritiesi

Belongs to the universal ribosomal protein uL5 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG0397 Eukaryota
COG0094 LUCA
GeneTreeiENSGT00910000144211
HOGENOMiHOG000231312
HOVERGENiHBG055214
KOiK02868
OMAiEDTMAWF
OrthoDBiEOG091G0LSV
TreeFamiTF300017

Family and domain databases

Gene3Di3.30.1440.10, 1 hit
InterProiView protein in InterPro
IPR002132 Ribosomal_L5
IPR031309 Ribosomal_L5_C
IPR020929 Ribosomal_L5_CS
IPR022803 Ribosomal_L5_dom_sf
IPR031310 Ribosomal_L5_N
PANTHERiPTHR11994 PTHR11994, 1 hit
PfamiView protein in Pfam
PF00281 Ribosomal_L5, 1 hit
PF00673 Ribosomal_L5_C, 1 hit
PIRSFiPIRSF002161 Ribosomal_L5, 1 hit
SUPFAMiSSF55282 SSF55282, 1 hit
PROSITEiView protein in PROSITE
PS00358 RIBOSOMAL_L5, 1 hit

Sequencei

Sequence statusi: Complete.

Q6IQI6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADQSEKKEN PMRELRIRKL CLNICVGESG DRLTRAAKVL EQLTGQTPVF
60 70 80 90 100
SKARYTVRSF GIRRNEKIAV HCTVRGAKAE EILEKGLKVR EYELRKNNFS
110 120 130 140 150
DTGNFGFGIQ EHIDLGIKYD PSIGIYGLDF YVVLGRPGFS IADKKRKTGR
160 170
IGAKHRIRKE EAMRWFQQKY DGIILPGK
Length:178
Mass (Da):20,377
Last modified:July 5, 2004 - v1
Checksum:i621E278ACEB2256F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABZ01086825 Genomic DNA No translation available.
BC071420 mRNA Translation: AAH71420.1
AY648841 mRNA Translation: AAT68159.1
RefSeqiNP_001002139.1, NM_001002139.1
UniGeneiDr.32573

Genome annotation databases

EnsembliENSDART00000063870; ENSDARP00000063869; ENSDARG00000043509
GeneIDi415229
KEGGidre:415229

Similar proteinsi

Entry informationi

Entry nameiQ6IQI6_DANRE
AccessioniPrimary (citable) accession number: Q6IQI6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: March 28, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health