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Q6IN42

- Q6IN42_RAT

UniProt

Q6IN42 - Q6IN42_RAT

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Protein
Submitted name: Grn protein
Gene
Grn
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Grn proteinImported
Gene namesi
Name:GrnImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi61983. Grn.

PTM / Processingi

Proteomic databases

PRIDEiQ6IN42.

Expressioni

Gene expression databases

ArrayExpressiQ6IN42.
GenevestigatoriQ6IN42.

Structurei

3D structure databases

ProteinModelPortaliQ6IN42.
SMRiQ6IN42. Positions 122-153, 205-235, 279-334.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000067856.
HOVERGENiHBG000845.

Family and domain databases

InterProiIPR006150. Cys_repeat_1.
IPR000118. Granulin.
[Graphical view]
PfamiPF00396. Granulin. 6 hits.
[Graphical view]
SMARTiSM00277. GRAN. 6 hits.
SM00289. WR1. 4 hits.
[Graphical view]
PROSITEiPS00799. GRANULINS. 6 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6IN42-1 [UniParc]FASTAAdd to Basket

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MWILVSWLAL VARLVAGTQC PDGQFCPVAC CLDQGGANYS CCNPLLDTWP    50
IITSRRLDGS CQIRDHCPDG YSCLLTVSGT SSCCPFSEGV SCDDGQHCCP 100
RGFHCSVDGK SCSQISDSLL GAVQCPGSQF ECPDSATCCI MIDGSWGCCP 150
MPQASCCEDR VHCCPHGASC DLVHTRCISP TGTHPLLKKF PAQRTNRAVA 200
FPFSVVCPDA KTQCPDDSTC CELPTGKYGC CPMPNAICCS DHLHCCPQDT 250
VCDLIQSKCI SKDYTTDLMT KLPGYPVNEV KCDLEVSCPD GYTCCRLNTG 300
AWGCCPFTKA VCCEDHIHCC PAGFQCHTET GTCELGVLQV PWMKKVTASL 350
SLPDPQILKN DVPCDDFSSC PSNNTCCRLS SGDWGCCPIP EAVCCEDRQH 400
CCPAGYTCNV KARTCEKDAG SVQPSMDLTF GSKVGNVECG AGHFCHDNQS 450
CCKDSQGGWA CCPYVKGVCC RDGRHCCPIG FHCSAKGTKC LRKKTPRWDI 500
LLRDPAPRPL L 511
Length:511
Mass (Da):55,030
Last modified:July 5, 2004 - v1
Checksum:i56E112233F2FC75F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC072469 mRNA. Translation: AAH72469.1.
RefSeqiNP_001139314.1. NM_001145842.1.
NP_058809.2. NM_017113.2.
UniGeneiRn.5820.

Genome annotation databases

GeneIDi29143.
KEGGirno:29143.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC072469 mRNA. Translation: AAH72469.1 .
RefSeqi NP_001139314.1. NM_001145842.1.
NP_058809.2. NM_017113.2.
UniGenei Rn.5820.

3D structure databases

ProteinModelPortali Q6IN42.
SMRi Q6IN42. Positions 122-153, 205-235, 279-334.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q6IN42.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 29143.
KEGGi rno:29143.

Organism-specific databases

CTDi 2896.
RGDi 61983. Grn.

Phylogenomic databases

HOGENOMi HOG000067856.
HOVERGENi HBG000845.

Miscellaneous databases

NextBioi 608123.

Gene expression databases

ArrayExpressi Q6IN42.
Genevestigatori Q6IN42.

Family and domain databases

InterProi IPR006150. Cys_repeat_1.
IPR000118. Granulin.
[Graphical view ]
Pfami PF00396. Granulin. 6 hits.
[Graphical view ]
SMARTi SM00277. GRAN. 6 hits.
SM00289. WR1. 4 hits.
[Graphical view ]
PROSITEi PS00799. GRANULINS. 6 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: LungImported.

Entry informationi

Entry nameiQ6IN42_RAT
AccessioniPrimary (citable) accession number: Q6IN42
Entry historyi
Integrated into UniProtKB/TrEMBL: July 5, 2004
Last sequence update: July 5, 2004
Last modified: March 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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