Acyl-CoA synthetase long-chain family member 5 - Rattus norvegicus (Rat)

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Unreviewed, UniProtKB/TrEMBL Q6IN15 (Q6IN15_RAT)

Last modified January 19, 2010. Version 39. History...

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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Acyl-CoA synthetase long-chain family member 5 EMBL AAH72497.1

Gene names

Name:

Acsl5 EMBL AAH72497.1 RGD 69402

Organism

Rattus norvegicus (Rat) EMBL AAH72497.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	683 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level.

Ontologies

Gene Ontology (GO)
Biological process	cellular response to insulin stimulus Inferred from expression pattern. Source: RGD fatty acid metabolic process Traceable author statement. Source: RGD fatty acid transport Inferred from genetic interaction. Source: RGD phospholipid biosynthetic process Inferred from genetic interaction. Source: RGD positive regulation of fatty acid beta-oxidation Inferred from genetic interaction. Source: RGD positive regulation of plasma membrane long-chain fatty acid transport Inferred from direct assay. Source: RGD positive regulation of triglyceride biosynthetic process Inferred from direct assay. Source: RGD response to cholesterol Inferred from expression pattern. Source: RGD response to glucose stimulus Inferred from expression pattern. Source: RGD response to nutrient Inferred from expression pattern. Source: RGD response to sucrose stimulus Inferred from expression pattern. Source: RGD
Cellular component	mitochondrial inner membrane Inferred from electronic annotation. Source: Compara
Molecular function	long-chain-fatty-acid-CoA ligase activity Inferred from direct assay. Source: RGD
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q6IN15-1 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 2C1D920CA62BEAED
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683

76,373

        10         20         30         40         50         60 
MLFIFNFLFS PLPTPALICL LTFGTAIFLW LINRPQPVLP LIDLDNQSVG IEGGARRGAF 

        70         80         90        100        110        120 
QKNNDLILYY FSDAKTLYEV FQRGLAVSDN GPCLGYRKPN QPYKWISYKQ VSDRAEYLGS 

       130        140        150        160        170        180 
CLLHKGYKPS QDQFIGIFAQ NRPEWVISEL ACYTYSMVAV PLYDTLGAEA IIYVINRADI 

       190        200        210        220        230        240 
SVVICDTPQK ATMLIENVEK DLTPGLKTVI LMDPFDDDLM KRGEKCGIEM LSLHDAENLG 

       250        260        270        280        290        300 
KENFKKPVPP NPEDLSVICF TSGTTGDPKG AMLTHQNIVS NMAAFLKFLE PIFQPTPEDV 

       310        320        330        340        350        360 
TISYLPLAHM FERLVQGVIF SCGGKIGFFQ GDIRLLPDDM KALKPTVFPT VPRLLNRVYD 

       370        380        390        400        410        420 
KVQNEAKTPL KKFLLNLAII SKFNEVRNGI IRRNSLWDKL VFSKIQSSLG GKVRLMITGA 

       430        440        450        460        470        480 
APISTPVLTF FRAAMGCWVF EAYGQTECTA GCSITSPGDW TAGHVGTPVS CNFVKLEDVA 

       490        500        510        520        530        540 
DMNYFSVNNE GEICIKGNNV FKGYLKDPEK TQEVLDKDGW LHTGDIGRWL PNGTLKIIDR 

       550        560        570        580        590        600 
KKNIFKLAQG EYIAPEKIEN VYSRSRPILQ VFVHGESLRS FLIGVVVPDP ESLPSFAAKI 

       610        620        630        640        650        660 
GVKGSFEELC QNQCVKKAIL EDLQKVGKEG GLKSFEQVKS IFVHPEPFSI ENGLLTPTLK 

       670        680 
AKRVELAKFF QTQIKSLYES IEE

References

[1]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Lung EMBL AAH72497.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC072497 mRNA. Translation: AAH72497.1.
IPI	IPI00213231.
UniGene	Rn.105862
3D structure databases
SMR	Q6IN15. Positions 74-673.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6IN15.
Genome annotation databases
Ensembl	ENSRNOT00000022126; ENSRNOP00000022126; ENSRNOG00000016265; Rattus norvegicus. [Genome view]
Phylogenomic databases
HOVERGEN	Q6IN15.
Gene expression databases
Genevestigator	Q6IN15.
Family and domain databases
InterPro	IPR020845. AMP-binding_CS. IPR000873. AMP-dep_Synth/Lig. [Graphical view]
Pfam	PF00501. AMP-binding. 1 hit. [Graphical view]
PROSITE	PS00455. AMP_BINDING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6IN15_RAT

Accession

Primary (citable) accession number: Q6IN15

Entry history

Integrated into UniProtKB/TrEMBL:	July 5, 2004
Last sequence update:	July 5, 2004
Last modified:	January 19, 2010
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information