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Protein

Uncharacterized protein C22orf42

Gene

C22orf42

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C22orf42
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 22

Organism-specific databases

HGNCiHGNC:27160. C22orf42.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000205856.
PharmGKBiPA164717091.

Polymorphism and mutation databases

BioMutaiC22orf42.
DMDMi74757715.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003443641 – 251Uncharacterized protein C22orf42Add BLAST251

Proteomic databases

PaxDbiQ6IC83.
PRIDEiQ6IC83.

PTM databases

iPTMnetiQ6IC83.
PhosphoSitePlusiQ6IC83.

Expressioni

Gene expression databases

BgeeiENSG00000205856.
GenevisibleiQ6IC83. HS.

Organism-specific databases

HPAiHPA019531.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000371529.

Structurei

3D structure databases

ProteinModelPortaliQ6IC83.
SMRiQ6IC83.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410KC7C. Eukaryota.
ENOG4110P99. LUCA.
GeneTreeiENSGT00410000029140.
HOGENOMiHOG000112088.
InParanoidiQ6IC83.
OMAiHGGVEEN.
OrthoDBiEOG091G0RZA.
PhylomeDBiQ6IC83.
TreeFamiTF340710.

Sequencei

Sequence statusi: Complete.

Q6IC83-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSKLTCCLG PSGGLNCDCC RPDVGPCHEC EIPETVAATA PASTTAKPAK
60 70 80 90 100
LDLKAKKAQL MQYLSLPKTP KMLKMSKGLD ARSKRWLKII WRRHGIWPLE
110 120 130 140 150
NIGPTEDVQA SAHGGVEENM TSDIEIPEAK HDHRPTEDVQ VSAHGGVEEN
160 170 180 190 200
ITSDIEISEA KHDHHLVEDL SESLSVCLED FMTSDLSESL SVSLEDFMTS
210 220 230 240 250
GLSESLSVSL EDLMTPEMAK ERYEDYLCWV KMARSRLNEP ISSQVLGLLR

L
Length:251
Mass (Da):27,691
Last modified:July 5, 2004 - v1
Checksum:i3D7BB7582B375BFF
GO

Natural variant

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Natural variantiVAR_04560673L → P. Corresponds to variant dbSNP:rs5998267Ensembl.1
Natural variantiVAR_045607217E → K. Corresponds to variant dbSNP:rs41344647Ensembl.1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR456485 mRNA. Translation: CAG30371.1.
Z83839, AL008723 Genomic DNA. Translation: CAI19488.1.
AL008723, Z83839 Genomic DNA. Translation: CAI23289.1.
CH471095 Genomic DNA. Translation: EAW60008.1.
CCDSiCCDS33639.1.
RefSeqiNP_001010859.1. NM_001010859.1.
UniGeneiHs.426551.

Genome annotation databases

EnsembliENST00000382097; ENSP00000371529; ENSG00000205856.
GeneIDi150297.
KEGGihsa:150297.
UCSCiuc003amd.4. human.

Keywords - Coding sequence diversityi

Polymorphism

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiCV042_HUMAN
AccessioniPrimary (citable) accession number: Q6IC83
Secondary accession number(s): A4QPH5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: July 5, 2004
Last modified: March 15, 2017
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 22
    Human chromosome 22: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations