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Unreviewed, UniProtKB/TrEMBL Q6IBS9 (Q6IBS9_HUMAN)

Last modified December 16, 2008. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    HADH2 protein EMBL CAG33004.1
Submitted name:
    Hydroxyacyl-Coenzyme A dehydrogenase, type II, isoform CRA_a EMBL EAW93157.1
    Hydroxysteroid (17-beta) dehydrogenase 10 EMBL CAI42653.1
Gene names
Name: HADH2 EMBL CAG33004.1
Synonyms: HSD17B10 EMBL CAI42653.1
ORF Names: RP3-339A18.2-001 EMBL CAI42653.1, hCG_19788 EMBL EAW93157.1
OrganismHomo sapiens (Human) EMBL CAG33004.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length261 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
Q6IBS9-1 [UniParc].

Last modified May 10, 2005. Version 1.
Checksum: 9E74F242E3E6FEF1

FASTA26126,923
        10         20         30         40         50         60 
MAAACRSVKG LVAVITGGAS GLGLATAERL VGQGASAVLL DLPNSGGEAQ AKKLGNNCVF 

        70         80         90        100        110        120 
APADVTSEKD VQTALALAKG KFGRVDVAVN CAGIAVASKT YNLKKGQTHT LEDFQRVLDV 

       130        140        150        160        170        180 
NLMGTFNVIR LVAGEMGQNE PDQGGQRGVI INTASVAAFE GQVGQAAYSA SKGGIVGMTL 

       190        200        210        220        230        240 
PIARDLAPIG IRVMTIAPGL FGTPLLTSLP EKVCNFLASQ VPFPSRLGDP AEYAHLVQAI 

       250        260 
IENPFLNGEV IRLDGAIRMQ P 

« Hide

References

[1]"Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)."
Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. expand/collapse author list , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Grafham D.
Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

CR456723 mRNA. Translation: CAG33004.1.
Z97054 Genomic DNA. Translation: CAI42653.1.
CH471154 Genomic DNA. Translation: EAW93157.1.
RefSeqNP_004484.1.
UniGeneHs.171280

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEQ6IBS9.

Genome annotation databases

EnsemblENSG00000072506. Homo sapiens. [Contig view]
GeneID3028.

Organism-specific databases

HGNCHGNC:4800. HSD17B10.
GenAtlasSearch...

Phylogenomic databases

HOVERGENQ6IBS9.

Family and domain databases

InterProIPR002198. DHase_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DHase.
IPR016040. NAD(P)-bd.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHERPTHR19410. ADH_short_C2. 1 hit.
PfamPF00106. adh_short. 1 hit.
[Graphical view]
PRINTSPR00081. GDHRDH.
PR00080. SDRFAMILY.
PROSITEPS00061. ADH_SHORT. 1 hit.
PS00061. ADH_SHORT. 1 hit. Uncertain.
[Graphical view]

Other Resources

NextBio11984.

Entry information

Entry nameQ6IBS9_HUMAN
AccessionPrimary (citable) accession number: Q6IBS9
Entry history
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: December 16, 2008
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information