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Protein
Submitted name:

CBX1 protein

Gene

CBX1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
CBX1 proteinImported
Submitted name:
Chromobox homolog 1 (HP1 beta homolog Drosophila ), isoform CRA_aImported
Submitted name:
cDNA, FLJ92997, Homo sapiens chromobox homolog 1 (HP1 beta homolog Drosophila ) (CBX1), mRNAImported
Gene namesi
Name:CBX1Imported
ORF Names:hCG_2000655Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

  • Nucleus SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusSAAS annotation

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA26126.

Expressioni

Gene expression databases

BgeeiENSG00000108468.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000225603.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 79ChromoInterPro annotationAdd BLAST59
Domaini117 – 175ChromoInterPro annotationAdd BLAST59

Phylogenomic databases

eggNOGiENOG410KDV3. Eukaryota.
ENOG4111H4A. LUCA.
HOVERGENiHBG000400.
KOiK11585.
OMAiWKGTDDA.
OrthoDBiEOG091G0RBS.

Family and domain databases

InterProiView protein in InterPro
IPR000953. Chromo/chromo_shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR008251. Chromo_shadow_dom.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
PfamiView protein in Pfam
PF00385. Chromo. 1 hit.
PF01393. Chromo_shadow. 1 hit.
PRINTSiPR00504. CHROMODOMAIN.
SMARTiView protein in SMART
SM00298. CHROMO. 2 hits.
SM00300. ChSh. 1 hit.
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiView protein in PROSITE
PS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 2 hits.

Sequencei

Sequence statusi: Complete.

Q6IBN6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKKQNKKKV EEVLEEEEEE YVVEKVLDRR VVKGKVEYLL KWKGFSDEDN
60 70 80 90 100
TWEPEENLDC PDLIAEFLQS QKTAHETDKS EGGKRKADSD SEDKGEESKP
110 120 130 140 150
KKKKEESEKP RGFARGLEPE RIIGATDSSG ELMFLMKWKN SDEADLVPAK
160 170 180
EANVKCPQVV ISFYEERLTW HSYPSEDDDK KDDKN
Length:185
Mass (Da):21,418
Last modified:May 10, 2005 - v1
Checksum:iBE687AF9C66E48E3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK312615 mRNA. Translation: BAG35502.1.
CR456766 mRNA. Translation: CAG33047.1.
CH471109 Genomic DNA. Translation: EAW94758.1.
CH471109 Genomic DNA. Translation: EAW94759.1.
CH471109 Genomic DNA. Translation: EAW94760.1.
CH471109 Genomic DNA. Translation: EAW94761.1.
RefSeqiNP_001120700.1. NM_001127228.1.
NP_006798.1. NM_006807.4.
UniGeneiHs.77254.

Genome annotation databases

GeneIDi10951.
KEGGihsa:10951.
UCSCiuc002ind.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK312615 mRNA. Translation: BAG35502.1.
CR456766 mRNA. Translation: CAG33047.1.
CH471109 Genomic DNA. Translation: EAW94758.1.
CH471109 Genomic DNA. Translation: EAW94759.1.
CH471109 Genomic DNA. Translation: EAW94760.1.
CH471109 Genomic DNA. Translation: EAW94761.1.
RefSeqiNP_001120700.1. NM_001127228.1.
NP_006798.1. NM_006807.4.
UniGeneiHs.77254.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000225603.

Protocols and materials databases

DNASUi10951.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10951.
KEGGihsa:10951.
UCSCiuc002ind.4. human.

Organism-specific databases

CTDi10951.
PharmGKBiPA26126.

Phylogenomic databases

eggNOGiENOG410KDV3. Eukaryota.
ENOG4111H4A. LUCA.
HOVERGENiHBG000400.
KOiK11585.
OMAiWKGTDDA.
OrthoDBiEOG091G0RBS.

Miscellaneous databases

GenomeRNAii10951.

Gene expression databases

BgeeiENSG00000108468.

Family and domain databases

InterProiView protein in InterPro
IPR000953. Chromo/chromo_shadow_dom.
IPR017984. Chromo_dom_subgr.
IPR023780. Chromo_domain.
IPR008251. Chromo_shadow_dom.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
PfamiView protein in Pfam
PF00385. Chromo. 1 hit.
PF01393. Chromo_shadow. 1 hit.
PRINTSiPR00504. CHROMODOMAIN.
SMARTiView protein in SMART
SM00298. CHROMO. 2 hits.
SM00300. ChSh. 1 hit.
SUPFAMiSSF54160. SSF54160. 2 hits.
PROSITEiView protein in PROSITE
PS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiQ6IBN6_HUMAN
AccessioniPrimary (citable) accession number: Q6IBN6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: February 15, 2017
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.