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Protein
Submitted name:

SHFM1 protein

Gene

SHFM1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SHFM1 proteinImported
Submitted name:
Split hand/foot malformation (Ectrodactyly) type 1Imported
Submitted name:
Split hand/foot malformation (Ectrodactyly) type 1, isoform CRA_aImported
Submitted name:
cDNA FLJ76393, highly similar to Homo sapiens split hand/foot malformation (ectrodactyly) type 1 (SHFM1), mRNAImported
Gene namesi
Name:SHFM1Imported
ORF Names:hCG_2023166Imported, tcag7.1219Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA35749.

Expressioni

Gene expression databases

BgeeiENSG00000127922.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000248566.

Structurei

3D structure databases

SMRiQ6IBB7. Positions 6-67.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG4764. Eukaryota.
ENOG41126I3. LUCA.
HOVERGENiHBG005536.
KOiK10881.
OMAiINEEWKE.
PhylomeDBiQ6IBB7.

Family and domain databases

InterProiIPR007834. DSS1_SEM1.
[Graphical view]
PfamiPF05160. DSS1_SEM1. 1 hit.
[Graphical view]
SMARTiSM01385. DSS1_SEM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6IBB7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEKKQPVDL GLLEEDDEFE EFPAEDWAGL DEDEDAHVWE DNWDDDNVED
60 70
DFSNQLRAEL EKHGYKMETS
Length:70
Mass (Da):8,278
Last modified:May 10, 2005 - v1
Checksum:i0E0F58D2F3D9F723
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK291070 mRNA. Translation: BAF83759.1.
CR456887 mRNA. Translation: CAG33168.1.
CH236949 Genomic DNA. Translation: EAL24125.1.
CH471091 Genomic DNA. Translation: EAW76746.1.
RefSeqiNP_006295.1. NM_006304.1.
UniGeneiHs.489201.

Genome annotation databases

GeneIDi7979.
KEGGihsa:7979.
UCSCiuc003uoi.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK291070 mRNA. Translation: BAF83759.1.
CR456887 mRNA. Translation: CAG33168.1.
CH236949 Genomic DNA. Translation: EAL24125.1.
CH471091 Genomic DNA. Translation: EAW76746.1.
RefSeqiNP_006295.1. NM_006304.1.
UniGeneiHs.489201.

3D structure databases

SMRiQ6IBB7. Positions 6-67.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000248566.

Protocols and materials databases

DNASUi7979.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7979.
KEGGihsa:7979.
UCSCiuc003uoi.4. human.

Organism-specific databases

CTDi7979.
PharmGKBiPA35749.

Phylogenomic databases

eggNOGiKOG4764. Eukaryota.
ENOG41126I3. LUCA.
HOVERGENiHBG005536.
KOiK10881.
OMAiINEEWKE.
PhylomeDBiQ6IBB7.

Miscellaneous databases

ChiTaRSiSHFM1. human.
GenomeRNAii7979.

Gene expression databases

BgeeiENSG00000127922.

Family and domain databases

InterProiIPR007834. DSS1_SEM1.
[Graphical view]
PfamiPF05160. DSS1_SEM1. 1 hit.
[Graphical view]
SMARTiSM01385. DSS1_SEM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6IBB7_HUMAN
AccessioniPrimary (citable) accession number: Q6IBB7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: September 7, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.