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Protein

Transcription elongation factor A protein-like 8

Gene

Tceal8

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

May be involved in transcriptional regulation.

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription elongation factor A protein-like 8
Short name:
TCEA-like protein 8
Alternative name(s):
Transcription elongation factor S-II protein-like 8
Up-regulated in nephrectomized rat kidney #1
Gene namesi
Name:Tceal8
ORF Names:UR-NR#1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi1359631. Tceal8.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002392181 – 117Transcription elongation factor A protein-like 8Add BLAST117

Proteomic databases

PaxDbiQ6I7R5.
PRIDEiQ6I7R5.

Expressioni

Tissue specificityi

Highly expressed in kidney. Moderately expressed in heart and lung. Low expression in brain and liver. Expression is up-regulated in nephrectomized kidney.1 Publication

Gene expression databases

BgeeiENSRNOG00000028585.
GenevisibleiQ6I7R5. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000053943.

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili73 – 100Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the TFS-II family. TFA subfamily.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410JBTZ. Eukaryota.
ENOG4111DNR. LUCA.
GeneTreeiENSGT00730000111091.
HOGENOMiHOG000231343.
HOVERGENiHBG098559.
InParanoidiQ6I7R5.
OMAiSCDENEG.
OrthoDBiEOG091G13IU.
PhylomeDBiQ6I7R5.

Family and domain databases

InterProiView protein in InterPro
IPR021156. TF_A-like/BEX.
PfamiView protein in Pfam
PF04538. BEX. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6I7R5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQKSCDENEG TPQNTPKADE GHPSEDPPQQ AGENLQASGE NVREETDGSL
60 70 80 90 100
RGEPAEPSPE PKEDTPARHL NPEEVIRGVD ELERLREEIR RVRNKFVLMH
110
WKQRHSRSRP YPVCFRP
Length:117
Mass (Da):13,447
Last modified:July 19, 2004 - v1
Checksum:iAC9F19DE6C7CBD9F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB108667 mRNA. Translation: BAD23892.1.
BC086418 mRNA. Translation: AAH86418.1.
RefSeqiNP_001014297.1. NM_001014275.1.
UniGeneiRn.3795.

Genome annotation databases

EnsembliENSRNOT00000017138; ENSRNOP00000053943; ENSRNOG00000028585.
GeneIDi367909.
KEGGirno:367909.
UCSCiRGD:1359631. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB108667 mRNA. Translation: BAD23892.1.
BC086418 mRNA. Translation: AAH86418.1.
RefSeqiNP_001014297.1. NM_001014275.1.
UniGeneiRn.3795.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000053943.

Proteomic databases

PaxDbiQ6I7R5.
PRIDEiQ6I7R5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000017138; ENSRNOP00000053943; ENSRNOG00000028585.
GeneIDi367909.
KEGGirno:367909.
UCSCiRGD:1359631. rat.

Organism-specific databases

CTDi90843.
RGDi1359631. Tceal8.

Phylogenomic databases

eggNOGiENOG410JBTZ. Eukaryota.
ENOG4111DNR. LUCA.
GeneTreeiENSGT00730000111091.
HOGENOMiHOG000231343.
HOVERGENiHBG098559.
InParanoidiQ6I7R5.
OMAiSCDENEG.
OrthoDBiEOG091G13IU.
PhylomeDBiQ6I7R5.

Miscellaneous databases

PROiPR:Q6I7R5.

Gene expression databases

BgeeiENSRNOG00000028585.
GenevisibleiQ6I7R5. RN.

Family and domain databases

InterProiView protein in InterPro
IPR021156. TF_A-like/BEX.
PfamiView protein in Pfam
PF04538. BEX. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiTCAL8_RAT
AccessioniPrimary (citable) accession number: Q6I7R5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2006
Last sequence update: July 19, 2004
Last modified: March 15, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.