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Protein
Submitted name:

Transformer-2a2

Gene

Tra2a4

Organism
Oryzias latipes (Japanese rice fish) (Japanese killifish)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transformer-2a2Imported
Submitted name:
Transformer-2a4Imported
Gene namesi
Name:Tra2a4Imported
Synonyms:Tra2a2Imported
OrganismiOryzias latipes (Japanese rice fish) (Japanese killifish)Imported
Taxonomic identifieri8090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeBeloniformesAdrianichthyidaeOryziinaeOryzias

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 96RRMInterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiKOG0118. Eukaryota.
COG0724. LUCA.
KOiK12897.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiView protein in InterPro
IPR012677. Nucleotide-bd_a/b_plait_sf.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6I6X8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNRRRHIGN RGNPDPSCCL GVFGLSLYTT ERDLREVFSK YGPLSEVNIV
60 70 80 90 100
YDQQSRRSRG FAFVYFENSE DSKEAKEQAN GMELDGRRIR VDFSITKRAH
110 120 130 140 150
TPTPGIYMGR PTYGGGGGGG GGSRRGSRDY DRGYDRGYDR GYDRGYDRDY
160 170 180
DRYDDREYRS YRRRSPSPYY SRGYRSRSRS YSPRHY
Length:186
Mass (Da):21,688
Last modified:July 19, 2004 - v1
Checksum:i1BBE5C9BF9B17892
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB159268 mRNA. Translation: BAD24698.1.
AB159270 mRNA. Translation: BAD24700.1.
RefSeqiNP_001098178.1. NM_001104708.1.
UniGeneiOla.171.

Genome annotation databases

GeneIDi100049284.
KEGGiola:100049284.

Similar proteinsi

Entry informationi

Entry nameiQ6I6X8_ORYLA
AccessioniPrimary (citable) accession number: Q6I6X8
Entry historyiIntegrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: February 28, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)