Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Os05g0556900 protein

Gene

Os05g0556900

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
Os05g0556900 proteinImported
Submitted name:
Putative ribosomal protein L35AImported
Submitted name:
Uncharacterized proteinImported
Submitted name:
cDNA clone:001-019-B02, full insert sequenceImported
Submitted name:
cDNA clone:J033107H21, full insert sequenceImported
Gene namesi
Ordered Locus Names:Os05g0556900Imported
ORF Names:OJ1214_E03.11Imported, OJ1214_E03.3Imported, OsJ_19494Imported, OSNPB_050556900Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 5

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os05g48310.1.

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0887. Eukaryota.
COG2451. LUCA.
OMAiSTRLYSK.
OrthoDBiEOG09360TQO.

Family and domain databases

InterProiIPR001780. Ribosomal_L35A.
IPR018266. Ribosomal_L35Ae_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR10902. PTHR10902. 1 hit.
PfamiPF01247. Ribosomal_L35Ae. 1 hit.
[Graphical view]
ProDomiPD012670. Ribosomal_L35Ae. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50447. SSF50447. 1 hit.
PROSITEiPS01105. RIBOSOMAL_L35AE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6I608-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKGRQGQRVR LYVRGTILGY KRSKSNQYEN TSLLQIEGVN TKEEVGWYAG
60 70 80 90 100
KRIAYVYKAK TKSNDSTIRC IWGKVTRPHG NSGVVRAKFR SNLPPTSMGK
110
KVRVFMYPSS I
Length:111
Mass (Da):12,661
Last modified:July 19, 2004 - v1
Checksum:iC1506843F4E142D2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC104709 Genomic DNA. Translation: AAT58704.1.
AC104709 Genomic DNA. Translation: AAT58712.1.
AP008211 Genomic DNA. Translation: BAF18198.1.
AK058689 mRNA. Translation: BAG86776.1.
AK102775 mRNA. Translation: BAG95713.1.
AP014961 Genomic DNA. Translation: BAS95274.1.
CM000142 Genomic DNA. Translation: EEE64640.1.
RefSeqiXP_015637381.1. XM_015781895.1.
XP_015639361.1. XM_015783875.1.
UniGeneiOs.88094.

Genome annotation databases

EnsemblPlantsiOS05T0556900-01; OS05T0556900-01; OS05G0556900.
GeneIDi4339572.
9271790.
GrameneiOS05T0556900-01; OS05T0556900-01; OS05G0556900.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC104709 Genomic DNA. Translation: AAT58704.1.
AC104709 Genomic DNA. Translation: AAT58712.1.
AP008211 Genomic DNA. Translation: BAF18198.1.
AK058689 mRNA. Translation: BAG86776.1.
AK102775 mRNA. Translation: BAG95713.1.
AP014961 Genomic DNA. Translation: BAS95274.1.
CM000142 Genomic DNA. Translation: EEE64640.1.
RefSeqiXP_015637381.1. XM_015781895.1.
XP_015639361.1. XM_015783875.1.
UniGeneiOs.88094.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os05g48310.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS05T0556900-01; OS05T0556900-01; OS05G0556900.
GeneIDi4339572.
9271790.
GrameneiOS05T0556900-01; OS05T0556900-01; OS05G0556900.

Phylogenomic databases

eggNOGiKOG0887. Eukaryota.
COG2451. LUCA.
OMAiSTRLYSK.
OrthoDBiEOG09360TQO.

Enzyme and pathway databases

ReactomeiR-OSA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-OSA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-OSA-72689. Formation of a pool of free 40S subunits.
R-OSA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-OSA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-OSA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Family and domain databases

InterProiIPR001780. Ribosomal_L35A.
IPR018266. Ribosomal_L35Ae_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR10902. PTHR10902. 1 hit.
PfamiPF01247. Ribosomal_L35Ae. 1 hit.
[Graphical view]
ProDomiPD012670. Ribosomal_L35Ae. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50447. SSF50447. 1 hit.
PROSITEiPS01105. RIBOSOMAL_L35AE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6I608_ORYSJ
AccessioniPrimary (citable) accession number: Q6I608
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: September 7, 2016
This is version 97 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.