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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Bacillus thuringiensis subsp. konkukian (strain 97-27)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rplMUniRule annotation
Ordered Locus Names:BT9727_0138
OrganismiBacillus thuringiensis subsp. konkukian (strain 97-27)
Taxonomic identifieri281309 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
Proteomesi
  • UP000001301 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002616881 – 14550S ribosomal protein L13Add BLAST145

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ6HPM6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000225286.
KOiK02871.
OMAiVLMGKHK.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6HPM6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTTFMAKAN EVERKWYVVD AEGQTLGRLA SEVASILRGK NKPTFTPHVD
60 70 80 90 100
TGDHVIIINA EKIHLTGNKL NDKIYYRHTN HPGGLKQRTA LEMRTNYPVQ
110 120 130 140
MLELAIKGML PKGRLGRQVS KKLNVYAGAE HPHQAQKPEV YELRG
Length:145
Mass (Da):16,428
Last modified:July 19, 2004 - v1
Checksum:i366DFD4C18AAB6FB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017355 Genomic DNA. Translation: AAT63889.1.
RefSeqiWP_001260793.1. NC_005957.1.
YP_034494.1. NC_005957.1.

Genome annotation databases

EnsemblBacteriaiAAT63889; AAT63889; BT9727_0138.
GeneIDi2857511.
31626805.
KEGGibtk:BT9727_0138.
PATRICifig|281309.8.peg.140.

Similar proteinsi

Entry informationi

Entry nameiRL13_BACHK
AccessioniPrimary (citable) accession number: Q6HPM6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: July 19, 2004
Last modified: June 7, 2017
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families