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Protein

Probable D-serine dehydratase

Gene

dsdA

Organism
Bacillus thuringiensis subsp. konkukian (strain 97-27)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

D-serine = pyruvate + NH3.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Ligandi

Pyridoxal phosphate

Enzyme and pathway databases

BioCyciBTHU281309:GJID-1717-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable D-serine dehydrataseUniRule annotation (EC:4.3.1.18UniRule annotation)
Alternative name(s):
D-serine deaminaseUniRule annotation
Short name:
DSDUniRule annotation
Gene namesi
Name:dsdAUniRule annotation
Ordered Locus Names:BT9727_1631
OrganismiBacillus thuringiensis subsp. konkukian (strain 97-27)
Taxonomic identifieri281309 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
ProteomesiUP000001301 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 446446Probable D-serine dehydratasePRO_0000185605Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei116 – 1161N6-(pyridoxal phosphate)lysineUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ6HKG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the serine/threonine dehydratase family. DsdA subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG3048.
HOGENOMiHOG000218072.
KOiK01753.
OMAiHCLFAEP.
OrthoDBiEOG6HXJ23.

Family and domain databases

HAMAPiMF_01030. D_Ser_dehydrat.
InterProiIPR011780. D_Ser_am_lyase.
IPR000634. Ser/Thr_deHydtase_PyrdxlP-BS.
IPR001926. TrpB-like_PLP-dep.
[Graphical view]
PANTHERiPTHR10314:SF9. PTHR10314:SF9. 1 hit.
PfamiPF00291. PALP. 1 hit.
[Graphical view]
SUPFAMiSSF53686. SSF53686. 1 hit.
TIGRFAMsiTIGR02035. D_Ser_am_lyase. 1 hit.
PROSITEiPS00165. DEHYDRATASE_SER_THR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6HKG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKEIEKLKEE YPLLNKLIAT EEVFWVNPNM EKYETAIKDS PLSEENVKDA
60 70 80 90 100
EERLKRFASY IAKVFPETKE TKGIIESPLL KIPSMKQALE KNYEQPILGE
110 120 130 140 150
LLLKCDSHLP ISGSIKARGG IYEVLKHAEQ LALQHGMLTE EDNYAILDSD
160 170 180 190 200
TCREFFATYS IAVGSTGNLG LSIGIMSAKL GFNVTVHMSA DAKQWKKDLL
210 220 230 240 250
RSKGVNVIEY EADYSKAVEE GRRQADADPS CYFVDDENSH DLFLGYAVAA
260 270 280 290 300
SRLQKQLEEL KIVVDEEHPL FVYLPCGVGG GPGGVAFGLK LLYKDNVHCF
310 320 330 340 350
FAEPTHSPCM LIGLMTGLHD KIAVQDIGID NVTDADGLAV GRPSGFVGKT
360 370 380 390 400
MEPFLSGNYT VSDEELYRLL KELADTENIY LEPSALAGMI GPVKVCKEDA
410 420 430 440
YLQKQQLMEK VQKGTHIVWG TGGSMVPEDV MNGYYKTGEA LTILEK
Length:446
Mass (Da):49,453
Last modified:July 19, 2004 - v1
Checksum:i29144A49497031AE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017355 Genomic DNA. Translation: AAT63288.1.
RefSeqiWP_000658347.1. NC_005957.1.
YP_035963.1. NC_005957.1.

Genome annotation databases

EnsemblBacteriaiAAT63288; AAT63288; BT9727_1631.
GeneIDi2854131.
KEGGibtk:BT9727_1631.
PATRICi18983975. VBIBacThu119411_1717.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017355 Genomic DNA. Translation: AAT63288.1.
RefSeqiWP_000658347.1. NC_005957.1.
YP_035963.1. NC_005957.1.

3D structure databases

ProteinModelPortaliQ6HKG3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAT63288; AAT63288; BT9727_1631.
GeneIDi2854131.
KEGGibtk:BT9727_1631.
PATRICi18983975. VBIBacThu119411_1717.

Phylogenomic databases

eggNOGiCOG3048.
HOGENOMiHOG000218072.
KOiK01753.
OMAiHCLFAEP.
OrthoDBiEOG6HXJ23.

Enzyme and pathway databases

BioCyciBTHU281309:GJID-1717-MONOMER.

Family and domain databases

HAMAPiMF_01030. D_Ser_dehydrat.
InterProiIPR011780. D_Ser_am_lyase.
IPR000634. Ser/Thr_deHydtase_PyrdxlP-BS.
IPR001926. TrpB-like_PLP-dep.
[Graphical view]
PANTHERiPTHR10314:SF9. PTHR10314:SF9. 1 hit.
PfamiPF00291. PALP. 1 hit.
[Graphical view]
SUPFAMiSSF53686. SSF53686. 1 hit.
TIGRFAMsiTIGR02035. D_Ser_am_lyase. 1 hit.
PROSITEiPS00165. DEHYDRATASE_SER_THR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 97-27.

Entry informationi

Entry nameiSDHD_BACHK
AccessioniPrimary (citable) accession number: Q6HKG3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 2005
Last sequence update: July 19, 2004
Last modified: July 22, 2015
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.