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Q6HKG3 (SDHD_BACHK) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable D-serine dehydratase

EC=4.3.1.18
Alternative name(s):
D-serine deaminase
Short name=DSD
Gene names
Name:dsdA
Ordered Locus Names:BT9727_1631
OrganismBacillus thuringiensis subsp. konkukian (strain 97-27) [Complete proteome] [HAMAP]
Taxonomic identifier281309 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group

Protein attributes

Sequence length446 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-serine = pyruvate + NH3. HAMAP-Rule MF_01030

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01030

Sequence similarities

Belongs to the serine/threonine dehydratase family. DsdA subfamily.

Ontologies

Keywords
   LigandPyridoxal phosphate
   Molecular functionLyase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-amino acid metabolic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionD-serine ammonia-lyase activity

Inferred from electronic annotation. Source: UniProtKB-EC

hydro-lyase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 446446Probable D-serine dehydratase HAMAP-Rule MF_01030
PRO_0000185605

Amino acid modifications

Modified residue1161N6-(pyridoxal phosphate)lysine By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6HKG3 [UniParc].

Last modified July 19, 2004. Version 1.
Checksum: 29144A49497031AE

FASTA44649,453
        10         20         30         40         50         60 
MKEIEKLKEE YPLLNKLIAT EEVFWVNPNM EKYETAIKDS PLSEENVKDA EERLKRFASY 

        70         80         90        100        110        120 
IAKVFPETKE TKGIIESPLL KIPSMKQALE KNYEQPILGE LLLKCDSHLP ISGSIKARGG 

       130        140        150        160        170        180 
IYEVLKHAEQ LALQHGMLTE EDNYAILDSD TCREFFATYS IAVGSTGNLG LSIGIMSAKL 

       190        200        210        220        230        240 
GFNVTVHMSA DAKQWKKDLL RSKGVNVIEY EADYSKAVEE GRRQADADPS CYFVDDENSH 

       250        260        270        280        290        300 
DLFLGYAVAA SRLQKQLEEL KIVVDEEHPL FVYLPCGVGG GPGGVAFGLK LLYKDNVHCF 

       310        320        330        340        350        360 
FAEPTHSPCM LIGLMTGLHD KIAVQDIGID NVTDADGLAV GRPSGFVGKT MEPFLSGNYT 

       370        380        390        400        410        420 
VSDEELYRLL KELADTENIY LEPSALAGMI GPVKVCKEDA YLQKQQLMEK VQKGTHIVWG 

       430        440 
TGGSMVPEDV MNGYYKTGEA LTILEK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017355 Genomic DNA. Translation: AAT63288.1.
RefSeqYP_035963.1. NC_005957.1.

3D structure databases

ProteinModelPortalQ6HKG3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING281309.BT9727_1631.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAT63288; AAT63288; BT9727_1631.
GeneID2854131.
KEGGbtk:BT9727_1631.
PATRIC18983975. VBIBacThu119411_1717.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3048.
HOGENOMHOG000218072.
KOK01753.
OMAMMTGLND.
OrthoDBEOG6HXJ23.

Enzyme and pathway databases

BioCycBTHU281309:GJID-1717-MONOMER.

Family and domain databases

HAMAPMF_01030. D_Ser_dehydrat.
InterProIPR011780. D_Ser_am_lyase.
IPR000634. Ser/Thr_deHydtase_PyrdxlP-BS.
IPR001926. Trp_syn_b_sub_like_PLP_eny_SF.
[Graphical view]
PANTHERPTHR10314:SF9. PTHR10314:SF9. 1 hit.
PfamPF00291. PALP. 1 hit.
[Graphical view]
SUPFAMSSF53686. SSF53686. 1 hit.
TIGRFAMsTIGR02035. D_Ser_am_lyase. 1 hit.
PROSITEPS00165. DEHYDRATASE_SER_THR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSDHD_BACHK
AccessionPrimary (citable) accession number: Q6HKG3
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 2005
Last sequence update: July 19, 2004
Last modified: May 14, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families