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Q6H501

- HKT6_ORYSJ

UniProt

Q6H501 - HKT6_ORYSJ

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Protein

Probable cation transporter HKT6

Gene

HKT6

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Probable cation transporter. May be involved in regulation of K+/Na+ homeostasis.

GO - Molecular functioni

  1. cation transmembrane transporter activity Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Ion transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Probable cation transporter HKT6
Short name:
OsHKT6
Gene namesi
Name:HKT6
Ordered Locus Names:Os02g0175000, LOC_Os02g07830
ORF Names:OSJNBa0073A21.31
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 2

Organism-specific databases

GrameneiQ6H501.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 4646CytoplasmicSequence AnalysisAdd
BLAST
Transmembranei47 – 6721Helical; Name=1Sequence AnalysisAdd
BLAST
Transmembranei108 – 12821Helical; Name=2Sequence AnalysisAdd
BLAST
Topological domaini129 – 19062CytoplasmicSequence AnalysisAdd
BLAST
Transmembranei191 – 21121Helical; Name=3Sequence AnalysisAdd
BLAST
Transmembranei264 – 28421Helical; Name=4Sequence AnalysisAdd
BLAST
Topological domaini285 – 32137CytoplasmicSequence AnalysisAdd
BLAST
Transmembranei322 – 34221Helical; Name=5Sequence AnalysisAdd
BLAST
Transmembranei383 – 40321Helical; Name=6Sequence AnalysisAdd
BLAST
Topological domaini404 – 42118CytoplasmicSequence AnalysisAdd
BLAST
Transmembranei422 – 44221Helical; Name=7Sequence AnalysisAdd
BLAST
Transmembranei494 – 51421Helical; Name=8Sequence AnalysisAdd
BLAST
Topological domaini515 – 53016CytoplasmicSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 530530Probable cation transporter HKT6PRO_0000070470Add
BLAST

Expressioni

Tissue specificityi

Weakly expressed.1 Publication

Gene expression databases

ExpressionAtlasiQ6H501. baseline.

Family & Domainsi

Domaini

HKT transporters are proposed to contain 4 pore-forming regions enclosed by transmembrane segments with each containing a potassium channel-like selectivity filter motif.

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0168.
InParanoidiQ6H501.

Family and domain databases

InterProiIPR003445. Cat_transpt.
[Graphical view]
PfamiPF02386. TrkH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6H501-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNHCLVVSHK KLQTFRTFAA SKFSSFTKSA QKSIKYSFQF IYQNNPLFVH
60 70 80 90 100
VAYFALISFA GYGSLKVLKP RDKSNTLKDL DVLFTSVSAS TVSSMATVEM
110 120 130 140 150
EDFSSAQLWV LTILMLIGGE VFTSMLGIHF MRAEFGTKES VSTRDHSPCI
160 170 180 190 200
DIESITSTKF GPSTQGTKVT VSFSELRMEN GGHVEPKTIK FLGFVVMGYL
210 220 230 240 250
LITNLGGSLL IYLYLNLVPS AHKILKRKGI GIIVFSVFTA ISSVGNCGFT
260 270 280 290 300
PVNENMIIFQ KNSILLLLIL PQILAGNTLF APCLRLMVWS LEKITGKKDC
310 320 330 340 350
RYILEYPKAI GYKHLMSTRE SVYLTLTVVS LIILQTVLFL SLEWSSVALD
360 370 380 390 400
GMSNYQKIVS ALFQSVNARH AGESVTDLSN LSSAILVLYT IMMYLPGYTS
410 420 430 440 450
FLPRHDGEDS KTEKINKRKG LLENWIFSHM SYLAIFVMLI CITERDSMAT
460 470 480 490 500
DPLNFNVFSI LFEVVAYGNV GFSVGYSCKR LLNHDARCKD ASYGFAGKWS
510 520 530
DNGKAILIIV MLFGRLKTFN MKGGRAWKLR
Length:530
Mass (Da):59,217
Last modified:July 19, 2004 - v1
Checksum:i1ECC845AA8677C44
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti465 – 4651V → VS in CAD37184. (PubMed:12795699)Curated
Sequence conflicti465 – 4651V → VS in CAD37185. (PubMed:12795699)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ491817 Genomic DNA. Translation: CAD37184.1.
AJ491818 mRNA. Translation: CAD37185.1.
AP005772 Genomic DNA. Translation: BAD26198.1.
AP003992 Genomic DNA. Translation: BAD27606.1.
RefSeqiNP_001046052.1. NM_001052587.1.
UniGeneiOs.79807.

Genome annotation databases

GeneIDi4328468.
KEGGiosa:4328468.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ491817 Genomic DNA. Translation: CAD37184.1 .
AJ491818 mRNA. Translation: CAD37185.1 .
AP005772 Genomic DNA. Translation: BAD26198.1 .
AP003992 Genomic DNA. Translation: BAD27606.1 .
RefSeqi NP_001046052.1. NM_001052587.1.
UniGenei Os.79807.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4328468.
KEGGi osa:4328468.

Organism-specific databases

Gramenei Q6H501.

Phylogenomic databases

eggNOGi COG0168.
InParanoidi Q6H501.

Gene expression databases

ExpressionAtlasi Q6H501. baseline.

Family and domain databases

InterProi IPR003445. Cat_transpt.
[Graphical view ]
Pfami PF02386. TrkH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sodium transport and HKT transporters: the rice model."
    Garciadeblas B., Senn M.E., Banuelos M.A., Rodriguez-Navarro A.
    Plant J. 34:788-801(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], TISSUE SPECIFICITY, NOMENCLATURE.
    Strain: cv. Nipponbare.
    Tissue: Root.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiHKT6_ORYSJ
AccessioniPrimary (citable) accession number: Q6H501
Secondary accession number(s): Q8L4V1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: July 19, 2004
Last modified: October 29, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3