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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Microchaete diplosiphon (Fremyella diplosiphon)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rplMUniRule annotation
Synonyms:rpl13UniRule annotation
OrganismiMicrochaete diplosiphon (Fremyella diplosiphon)
Taxonomic identifieri1197 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaNostocalesRivulariaceaeMicrochaete

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002617271 – 15150S ribosomal protein L13Add BLAST151

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ6H001.
SMRiQ6H001.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
IPR036899. Ribosomal_L13_sf.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6H001-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKTYLPPQD ALEREWYIVD ATDQRLGRLA SEIAMVLRGK KKAEYTPHLD
60 70 80 90 100
TGDFVIVINA EKIAVTGKKR TQKLYRRHSG RPGGMKTETF AKLQQRIPER
110 120 130 140 150
IVEHAVKGML PKNSLGKQLF TKLKVYAGPT HPHAAQKPKE LKVNTIPGAE

S
Length:151
Mass (Da):17,000
Last modified:November 28, 2006 - v2
Checksum:i4F4C5351A8D62595
GO

Sequence cautioni

Q6H001: The sequence AAT41968 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY548459 Genomic DNA. Translation: AAT41968.1. Different initiation.

Similar proteinsi

Entry informationi

Entry nameiRL13_MICDP
AccessioniPrimary (citable) accession number: Q6H001
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 28, 2006
Last modified: October 25, 2017
This is version 55 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families