Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q6GYP7 - RGPA1_MOUSE

UniProt

Q6GYP7 - RGPA1_MOUSE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Ral GTPase-activating protein subunit alpha-1

Gene

Ralgapa1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 5 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic subunit of the heterodimeric RalGAP1 complex which acts as a GTPase activator for the Ras-like small GTPases RALA and RALB (By similarity). May interact with the HLH region of TCF3/isoform E12.By similarity

GO - Molecular functioni

  1. protein heterodimerization activity Source: MGI
  2. Ral GTPase activator activity Source: UniProtKB

GO - Biological processi

  1. activation of Ral GTPase activity Source: UniProtKB
  2. regulation of transcription, DNA-templated Source: MGI
Complete GO annotation...

Keywords - Molecular functioni

GTPase activation

Names & Taxonomyi

Protein namesi
Recommended name:
Ral GTPase-activating protein subunit alpha-1
Alternative name(s):
GAP-related-interacting partner to E12
Short name:
GRIPE
GTPase-activating RapGAP domain-like 1
Tuberin-like protein 1
p240
Gene namesi
Name:Ralgapa1
Synonyms:Garnl1, Kiaa0884, Tulip1
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus
ProteomesiUP000000589: Chromosome 12

Organism-specific databases

MGIiMGI:1931050. Ralgapa1.

Subcellular locationi

Cytoplasm 1 Publication. Nucleus 1 Publication
Note: Translocated to the nucleus, when associated with TCF3/E12.

GO - Cellular componenti

  1. cytoplasm Source: MGI
  2. nucleus Source: MGI
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 20352035Ral GTPase-activating protein subunit alpha-1PRO_0000056754Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei753 – 7531PhosphothreonineBy similarity
Modified residuei772 – 7721PhosphoserineBy similarity
Modified residuei777 – 7771PhosphothreonineBy similarity
Modified residuei796 – 7961PhosphoserineBy similarity
Modified residuei859 – 8591Phosphoserine1 Publication
Modified residuei860 – 8601Phosphoserine1 Publication
Modified residuei863 – 8631PhosphoserineBy similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

MaxQBiQ6GYP7.
PaxDbiQ6GYP7.
PRIDEiQ6GYP7.

PTM databases

PhosphoSiteiQ6GYP7.

Expressioni

Tissue specificityi

Expressed during embryogenesis. Expressed in the adult brain, particularly in neurons of the cortex and hippocampus.1 Publication

Developmental stagei

Expression decreased during development, but persists in the adult brain.

Gene expression databases

BgeeiQ6GYP7.
CleanExiMM_GARNL1.
ExpressionAtlasiQ6GYP7. baseline and differential.
GenevestigatoriQ6GYP7.

Interactioni

Subunit structurei

Component of the heterodimeric RalGAP1 complex with RALGAPB. Heterodimerization is required for activity (By similarity). Interacts with the HLH region of TCF3/isoform E12.By similarity1 Publication

Protein-protein interaction databases

BioGridi208171. 1 interaction.
IntActiQ6GYP7. 1 interaction.
MINTiMINT-4096796.

Structurei

3D structure databases

ProteinModelPortaliQ6GYP7.
SMRiQ6GYP7. Positions 1790-1955.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1795 – 2003209Rap-GAPPROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni1326 – 2035710Minimal domain that binds to TCF3/E12Add
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili1713 – 174836Sequence AnalysisAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi379 – 3824Poly-Ser

Sequence similaritiesi

Contains 1 Rap-GAP domain.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG250663.
GeneTreeiENSGT00390000017866.
HOVERGENiHBG051842.
InParanoidiQ6GYP7.
OMAiQVFDYLC.
OrthoDBiEOG7N63KR.
PhylomeDBiQ6GYP7.
TreeFamiTF324484.

Family and domain databases

InterProiIPR016024. ARM-type_fold.
IPR000331. Rap_GAP_dom.
[Graphical view]
PfamiPF02145. Rap_GAP. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS50085. RAPGAP. 1 hit.
[Graphical view]

Sequences (6)i

Sequence statusi: Complete.

This entry describes 6 isoformsi produced by alternative splicing. Align

Isoform 1 (identifier: Q6GYP7-1) [UniParc]FASTAAdd to Basket

Also known as: 3

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MFSKKPHGDV KKSTQKVLDT KKDALTRLKH LRIVIENAES IDLKQFFDQH 
        60         70         80         90        100
FSHIYYVFFE NFVTIEASLK QKGHKSQREE LDAILFIFEK ILQLLPERIH 
       110        120        130        140        150
QRWQFHSIGL ILKKLLHTGN SLKIRREGVR LFLLWLQALQ DNCSKEQLWM 
       160        170        180        190        200
FSCLIPGFSA PQSEYGPRTL DNLINPPLSL QETQVTIEEV TPLVPPQSGD 
       210        220        230        240        250
KGQEDLTSYF LEALLKYIVI QVKSLEWKNK ENQERGFSFL FSHFKKFYLP 
       260        270        280        290        300
YIFPNICKEN SLYHPVLDIP QIRPKPHYVM IKKDAETNET IYCTKEPFIQ 
       310        320        330        340        350
ARVIVIRWLV SFWLEPKPHS GPNIPGMEGE VLPKNIQRAA ASLVSREESK 
       360        370        380        390        400
NDTVDKVDKS AEPEQSHSNT STLTEREPSS SSLCSIDEEH LTDIEIVRRV 
       410        420        430        440        450
FSSKRSNVNF VTEIFRQAFL LPICEAAAMR KVVKVYQEWI QQEEKPLFMQ 
       460        470        480        490        500
EPEDTAITCS DIPCSETVAD HDSAIEDGEK REEENGTSTS EHVRNSSWTK 
       510        520        530        540        550
NGSYQEAFHV CEEATEQNIQ AGTQAVLQVF IINSSNIFLL EPANEIKNLL 
       560        570        580        590        600
DEHTDMCKRI LNIYRYMVVQ VSMDKKTWEQ MLLVLLRVTE SVLKMSSQAF 
       610        620        630        640        650
LQFQGKKSMT LAGRLAGPLF QTLIVAWIKA NLNVYISREL WDDLLSVLSS 
       660        670        680        690        700
LTYWEELATE WSLTMETLTK VLARNLYSLD LSDLPLDKLS EQKQKKHKGK 
       710        720        730        740        750
GVGHEFQKVS VDKSFSRGWS RDQPGQAPMR QRSATTTGSP GTEKARSIVR 
       760        770        780        790        800
QKTVDIDDAQ ILPRSTRVRH FSQSEDTGNE VFGALHEEQP LPRSSSTSDI 
       810        820        830        840        850
LEPFTVERAK VNKEDTSPKL PPLNSETGGN SANVPDLMDE FIAERLRSGN 
       860        870        880        890        900
ASTMTRRGSS PGSLEIPKDL PDILNKQNQM RPVDDPGVPS EWTSPASAGS 
       910        920        930        940        950
SDLMSSDSHS DSFSAFQCEG RKFDNFGFGT DIGIPSSADV DLGSGHHQST 
       960        970        980        990       1000
EEQEVASLTT LHLDSETSSL NQQAFSAEVA TVTGSESASP VHSALGSRSQ 
      1010       1020       1030       1040       1050
TPSPSTLSRA HIEQKDLQLD EKLHHSVLQT PDDLEISEFP SECCSVMAGG 
      1060       1070       1080       1090       1100
TLTGWHADVA TVMWRRMLGI LGDVNAIMDP EIHAQVFDYL CELWQNLAKI 
      1110       1120       1130       1140       1150
RDNLGISADN LTSPSPPVLI PPLRILTPWL FKATMLTDKY KQGKLHAYKL 
      1160       1170       1180       1190       1200
ICNTMKRRQD VSPNRDFLTH FYNIMHCGLL HIDQDIVNTI IKHCSPQFFS 
      1210       1220       1230       1240       1250
LGLPGATMLI MDFIIAAGRV ASSAFLNAPR VEAQVLLGSL VCFPNLYCEL 
      1260       1270       1280       1290       1300
PALHPNIPDI AVSQFTDVKE LIIKTVLSSA RDEPSGPARC VALCSLGIWI 
      1310       1320       1330       1340       1350
CEELVHESHH PQIKEALNVI CVSLKFTNKT VAHVACNMLH MLVHYVPRLQ 
      1360       1370       1380       1390       1400
IHQPQSPLKI IQILIATITH LLPSTEASSY EMDKRLVVSL LLCLLDWIMA 
      1410       1420       1430       1440       1450
LPLKTLLQPV HATGAENDKT EKSVLNCIYK VLHGCVYGAQ SFSNPKYFPI 
      1460       1470       1480       1490       1500
SLSDLASVDY DPFMHLESLK EPEPLHSPDS ERSSKLQPVT EVKTQMQQGL 
      1510       1520       1530       1540       1550
ISIAARTVIT HLVNHLGHYP MSGGPAMLTS QVCENHDNHY SESTELSPEL 
      1560       1570       1580       1590       1600
FESPNIQFFV LNNTTLVSCI QIRSEESMPG GGLAAGLVSA NSNVRIIVRD 
      1610       1620       1630       1640       1650
LSGKYSWDSA ILYGPPIVSG LPEPTSFILS MSDQEKPEEP PTSNECLEDI 
      1660       1670       1680       1690       1700
AVKDGLSLQL RRFRETVPTW STIREEEDVL DELLQYLGTT SPECLQRTGI 
      1710       1720       1730       1740       1750
SLNVPAPQPL CISEKQENDV INAILKQYTE EKEFVEKHFN DLNMKASEQD 
      1760       1770       1780       1790       1800
EPTPQKPQSA FYYCRLLLSI LGMNSWDKRR SFHLLKKNEK LLRELRNLDS 
      1810       1820       1830       1840       1850
RQCRETHKIA VFYVAEGQED KYSILTNIGG SQAYEDFVAG LGWEVNLTNH 
      1860       1870       1880       1890       1900
CGFMGGLQKN RSTGLTTPYF ATSTVEVIFH VSTRMPSDSD DSLTKKLRHL 
      1910       1920       1930       1940       1950
GNDEVHIVWS EHTRDYRRGI IPTEFGDVLI VIYPMKNHMF SIQIMKKPEV 
      1960       1970       1980       1990       2000
PFFGPLFDGA IVNGKVLPIM VRSTAINASR ALKSLIPLYQ NFYEERARYL 
      2010       2020       2030 
QTIVQHHLEP TTFEDFAAQV FSPAPYHHFP ADADH
Length:2,035
Mass (Da):229,389
Last modified:July 19, 2004 - v1
Checksum:i1F4C3E24022EBB54
GO
Isoform 2 (identifier: Q6GYP7-2) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     2034-2035: DH → VGSYPEIPPSDAAPAAQVDGADLASPMSPRTSKSR

Show »
Length:2,068
Mass (Da):232,646
Checksum:iCD55170FA5FBCF6B
GO
Isoform 4 (identifier: Q6GYP7-3) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1298: Missing.
     1299-1304: WICEEL → MMRFVE

Note: No experimental confirmation available.

Show »
Length:737
Mass (Da):83,311
Checksum:i3D72CD7AA1E1F7D4
GO
Isoform 5 (identifier: Q6GYP7-4) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1035-1037: EIS → GNA
     1038-2035: Missing.

Show »
Length:1,037
Mass (Da):117,170
Checksum:i23D34AB339388DC0
GO
Isoform 6 (identifier: Q6GYP7-5) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-1337: Missing.
     1897-1904: LRHLGNDE → VSAEGKHF
     1905-2035: Missing.

Note: No experimental confirmation available.

Show »
Length:567
Mass (Da):63,656
Checksum:i0B413D16DC68FE68
GO
Isoform 1S (identifier: Q6GYP7-6) [UniParc]FASTAAdd to Basket

The sequence of this isoform differs from the canonical sequence as follows:
     1-555: Missing.

Note: May be a partial isoform 1. No experimental confirmation available.

Show »
Length:1,480
Mass (Da):165,341
Checksum:i3628A0BE37D0D0BB
GO

Sequence cautioni

The sequence BAA92774.1 differs from that shown. Reason: Erroneous termination at position 1745. Translated as Lys.Curated
The sequence BAC98046.1 differs from that shown. Reason: Erroneous initiation. Curated

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti420 – 4201L → V in BAC98046. (PubMed:14621295)Curated
Sequence conflicti651 – 6511L → S in AAL47577. (PubMed:12200424)Curated
Sequence conflicti724 – 7241P → L in AAL47577. (PubMed:12200424)Curated
Sequence conflicti775 – 7751E → V in AAL47577. (PubMed:12200424)Curated
Sequence conflicti869 – 8691D → G in AAL47577. (PubMed:12200424)Curated
Sequence conflicti1166 – 11661D → N in AAL47577. (PubMed:12200424)Curated
Sequence conflicti1365 – 13651I → V in BAA92774. (PubMed:16141072)Curated
Sequence conflicti1398 – 13981I → T in BAA92774. (PubMed:16141072)Curated
Sequence conflicti1494 – 14941T → P in BAA92774. (PubMed:16141072)Curated
Sequence conflicti1586 – 15861G → S in BAA92774. (PubMed:16141072)Curated
Sequence conflicti1634 – 16341Q → P in BAA92774. (PubMed:16141072)Curated
Sequence conflicti1638 – 16381E → K in BAA92774. (PubMed:16141072)Curated
Sequence conflicti1674 – 16741R → Q in BAA92774. (PubMed:16141072)Curated
Sequence conflicti1775 – 17806SWDKRR → WAAGIPGTNGG in AAL47577. (PubMed:12200424)Curated
Sequence conflicti1966 – 19683VLP → SSA in AAL47577. (PubMed:12200424)Curated

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei1 – 13371337Missing in isoform 6. 1 PublicationVSP_011331Add
BLAST
Alternative sequencei1 – 12981298Missing in isoform 4. 1 PublicationVSP_011332Add
BLAST
Alternative sequencei1 – 555555Missing in isoform 1S. 1 PublicationVSP_011330Add
BLAST
Alternative sequencei1035 – 10373EIS → GNA in isoform 5. 2 PublicationsVSP_011333
Alternative sequencei1038 – 2035998Missing in isoform 5. 2 PublicationsVSP_011334Add
BLAST
Alternative sequencei1299 – 13046WICEEL → MMRFVE in isoform 4. 1 PublicationVSP_011335
Alternative sequencei1897 – 19048LRHLGNDE → VSAEGKHF in isoform 6. 1 PublicationVSP_011336
Alternative sequencei1905 – 2035131Missing in isoform 6. 1 PublicationVSP_011337Add
BLAST
Alternative sequencei2034 – 20352DH → VGSYPEIPPSDAAPAAQVDG ADLASPMSPRTSKSR in isoform 2. 1 PublicationVSP_011338

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY066011 mRNA. Translation: AAL47577.1.
AY596972 mRNA. Translation: AAT49273.1.
AY596973 mRNA. Translation: AAT49274.1.
AY596974 mRNA. Translation: AAT49275.1.
AK129236 mRNA. Translation: BAC98046.1. Different initiation.
AB032400 mRNA. Translation: BAA92774.1. Sequence problems.
AK042116 mRNA. Translation: BAC31171.1.
AK083518 mRNA. Translation: BAC38939.1.
CCDSiCCDS36452.1. [Q6GYP7-1]
RefSeqiNP_001003719.1. NM_001003719.2.
NP_001106185.1. NM_001112714.2. [Q6GYP7-1]
NP_001273192.1. NM_001286263.1.
NP_064378.4. NM_019994.5. [Q6GYP7-1]
UniGeneiMm.292180.
Mm.398098.

Genome annotation databases

EnsembliENSMUST00000085385; ENSMUSP00000082503; ENSMUSG00000021027. [Q6GYP7-1]
ENSMUST00000110687; ENSMUSP00000106315; ENSMUSG00000021027. [Q6GYP7-1]
GeneIDi56784.
KEGGimmu:56784.
UCSCiuc007nou.1. mouse. [Q6GYP7-1]
uc007nov.1. mouse. [Q6GYP7-2]
uc007now.1. mouse. [Q6GYP7-5]
uc007nox.1. mouse. [Q6GYP7-4]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY066011 mRNA. Translation: AAL47577.1.
AY596972 mRNA. Translation: AAT49273.1.
AY596973 mRNA. Translation: AAT49274.1.
AY596974 mRNA. Translation: AAT49275.1.
AK129236 mRNA. Translation: BAC98046.1. Different initiation.
AB032400 mRNA. Translation: BAA92774.1. Sequence problems.
AK042116 mRNA. Translation: BAC31171.1.
AK083518 mRNA. Translation: BAC38939.1.
CCDSiCCDS36452.1. [Q6GYP7-1]
RefSeqiNP_001003719.1. NM_001003719.2.
NP_001106185.1. NM_001112714.2. [Q6GYP7-1]
NP_001273192.1. NM_001286263.1.
NP_064378.4. NM_019994.5. [Q6GYP7-1]
UniGeneiMm.292180.
Mm.398098.

3D structure databases

ProteinModelPortaliQ6GYP7.
SMRiQ6GYP7. Positions 1790-1955.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi208171. 1 interaction.
IntActiQ6GYP7. 1 interaction.
MINTiMINT-4096796.

PTM databases

PhosphoSiteiQ6GYP7.

Proteomic databases

MaxQBiQ6GYP7.
PaxDbiQ6GYP7.
PRIDEiQ6GYP7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000085385; ENSMUSP00000082503; ENSMUSG00000021027. [Q6GYP7-1]
ENSMUST00000110687; ENSMUSP00000106315; ENSMUSG00000021027. [Q6GYP7-1]
GeneIDi56784.
KEGGimmu:56784.
UCSCiuc007nou.1. mouse. [Q6GYP7-1]
uc007nov.1. mouse. [Q6GYP7-2]
uc007now.1. mouse. [Q6GYP7-5]
uc007nox.1. mouse. [Q6GYP7-4]

Organism-specific databases

CTDi253959.
MGIiMGI:1931050. Ralgapa1.
RougeiSearch...

Phylogenomic databases

eggNOGiNOG250663.
GeneTreeiENSGT00390000017866.
HOVERGENiHBG051842.
InParanoidiQ6GYP7.
OMAiQVFDYLC.
OrthoDBiEOG7N63KR.
PhylomeDBiQ6GYP7.
TreeFamiTF324484.

Miscellaneous databases

NextBioi313310.
PROiQ6GYP7.
SOURCEiSearch...

Gene expression databases

BgeeiQ6GYP7.
CleanExiMM_GARNL1.
ExpressionAtlasiQ6GYP7. baseline and differential.
GenevestigatoriQ6GYP7.

Family and domain databases

InterProiIPR016024. ARM-type_fold.
IPR000331. Rap_GAP_dom.
[Graphical view]
PfamiPF02145. Rap_GAP. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 1 hit.
PROSITEiPS50085. RAPGAP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Cloning and characterization of GRIPE, a novel interacting partner of the transcription factor E12 in developing mouse forebrain."
    Heng J.I.T., Tan S.-S.
    J. Biol. Chem. 277:43152-43159(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1S), SUBCELLULAR LOCATION, TISSUE SPECIFICITY, INTERACTION WITH TCF3/E12.
    Strain: C57BL/6J.
    Tissue: Forebrain.
  2. "Cloning, genomic structure and expression profile of TULIP1 (GARNL1), a brain-expressed candidate gene for 14q13-linked neurological phenotypes and its murine homolog."
    Schwarzbraun T., Vincent J.B., Schumacher A., Geschwind D.H., Oliveira J., Windpassinger C., Ofner L., Ledinegg M.K., Kroisel P.M., Wagner K., Petek E.
    Genomics 84:577-586(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2).
    Strain: BALB/c.
  3. "Prediction of the coding sequences of mouse homologues of KIAA gene: III. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
    Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Nagase T., Ohara O., Koga H.
    DNA Res. 10:167-180(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 5).
    Tissue: Embryonic tail.
  4. "The transcriptional landscape of the mammalian genome."
    Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
    , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
    Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 4; 5 AND 6).
    Strain: C57BL/6J.
    Tissue: Thymus.
  5. Lubec G., Sunyer B., Chen W.-Q.
    Submitted (JAN-2009) to UniProtKB
    Cited for: PROTEIN SEQUENCE OF 339-350, IDENTIFICATION BY MASS SPECTROMETRY.
    Strain: OF1.
    Tissue: Hippocampus.
  6. Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-859 AND SER-860, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
    Tissue: Liver.
  7. "The phagosomal proteome in interferon-gamma-activated macrophages."
    Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
    Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Entry informationi

Entry nameiRGPA1_MOUSE
AccessioniPrimary (citable) accession number: Q6GYP7
Secondary accession number(s): Q6GYP6
, Q6ZQ28, Q8BNJ5, Q8C9G8, Q8CIW4, Q9JMC4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 16, 2004
Last sequence update: July 19, 2004
Last modified: February 4, 2015
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.