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Protein
Submitted name:

Matrix metalloproteinase 13

Gene

Mmp13

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. metalloendopeptidase activity Source: InterPro

GO - Biological processi

  1. bone morphogenesis Source: Ensembl
  2. collagen catabolic process Source: Ensembl
  3. extracellular matrix disassembly Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Matrix metalloproteinase 13Imported
Gene namesi
Name:Mmp13Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1340026. Mmp13.

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: InterPro
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiQ6GX98.
ExpressionAtlasiQ6GX98. baseline and differential.
GenevestigatoriQ6GX98.

Structurei

3D structure databases

ProteinModelPortaliQ6GX98.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di2.110.10.10. 1 hit.
InterProiIPR028711. Collagenase_3.
IPR000585. Hemopexin-like_dom.
IPR018487. Hemopexin-like_repeat.
IPR018486. Hemopexin_CS.
[Graphical view]
PANTHERiPTHR10201:SF130. PTHR10201:SF130. 1 hit.
PfamiPF00045. Hemopexin. 1 hit.
[Graphical view]
SMARTiSM00120. HX. 1 hit.
[Graphical view]
SUPFAMiSSF50923. SSF50923. 1 hit.
PROSITEiPS00024. HEMOPEXIN. 1 hit.
PS51642. HEMOPEXIN_2. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q6GX98-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
FFWRLHPQQV EAELFLTKSF WPELPNHVDA AYEHPSRDLM FIFRGRKFWA
60 70
LNGYDILEGY PRKISDLGFP KEVKRLSAA
Length:79
Mass (Da):9,426
Last modified:July 18, 2004 - v1
Checksum:iD2577E07FD593B2E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei79 – 791Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY622973 mRNA. Translation: AAT46404.1.
UniGeneiMm.5022.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY622973 mRNA. Translation: AAT46404.1.
UniGeneiMm.5022.

3D structure databases

ProteinModelPortaliQ6GX98.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:1340026. Mmp13.

Miscellaneous databases

ChiTaRSiMmp13. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiQ6GX98.
ExpressionAtlasiQ6GX98. baseline and differential.
GenevestigatoriQ6GX98.

Family and domain databases

Gene3Di2.110.10.10. 1 hit.
InterProiIPR028711. Collagenase_3.
IPR000585. Hemopexin-like_dom.
IPR018487. Hemopexin-like_repeat.
IPR018486. Hemopexin_CS.
[Graphical view]
PANTHERiPTHR10201:SF130. PTHR10201:SF130. 1 hit.
PfamiPF00045. Hemopexin. 1 hit.
[Graphical view]
SMARTiSM00120. HX. 1 hit.
[Graphical view]
SUPFAMiSSF50923. SSF50923. 1 hit.
PROSITEiPS00024. HEMOPEXIN. 1 hit.
PS51642. HEMOPEXIN_2. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Expression profile of matrix-metalloproteinases and their inhibitors in actue and chronic demyelinating Theiler's murine encephalomyelitis."
    Ulrich R., Gerhauser I., Seeliger F., Baumgaertner W., Alldinger S.
    Acta Neuropathol. 108:366-366(2003)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SJL/JHanHsdImported.
    Tissue: UterusImported.
  2. Ulrich R.G., Alldinger S., Baumgaertner W.
    Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SJL/JHanHsdImported.
    Tissue: UterusImported.

Entry informationi

Entry nameiQ6GX98_MOUSE
AccessioniPrimary (citable) accession number: Q6GX98
Entry historyi
Integrated into UniProtKB/TrEMBL: July 18, 2004
Last sequence update: July 18, 2004
Last modified: March 31, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.