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Q6GQW1 (Q6GQW1_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Slc4a1ap protein EMBL AAH72588.1
Gene names
Name:Slc4a1ap MGI 1196608
OrganismMus musculus (Mouse) EMBL AAH72588.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length537 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Molecular_functiondouble-stranded RNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH72588.1

Sequences

Sequence LengthMass (Da)Tools
Q6GQW1 [UniParc].

Last modified July 19, 2004. Version 1.
Checksum: 050F02043EB5225F

FASTA53759,851
        10         20         30         40         50         60 
RLRMADPTPQ LDAPAPQEVS SEFKKPVLPV PSAVRGKAPA SSPSVSEDVK KECLAAQLDS 

        70         80         90        100        110        120 
GCEEPEVPPP QPDSQETGGP PVEQLRSPRV APASGGPTRA PPYREPSWGS PATAPYSLET 

       130        140        150        160        170        180 
LKGGTILGTR TLKDTSCCFF GRLASCDICL EHPSVSRYHA VLQHRGADPS GDSEGHEQGF 

       190        200        210        220        230        240 
YLYDLGSTHG TFLNKTRIPP RTYCRVHVGH VMRFGGSTRL FILQGPEEDR EAESELTVTQ 

       250        260        270        280        290        300 
LKELRKQQQI LLEKKMLGED SDEEEEANTT EGKSSRSGQD DELGCTWGMG EDAVEDEAEE 

       310        320        330        340        350        360 
NPIALDFQQD REAFYIKDPK KALQGFFDRE GEELEYEFDE QGHSTWLCRV RLPVDDSTGK 

       370        380        390        400        410        420 
QLVAEAIHSG KKKEAMVQCS LEACRVLDTL GLLRQEAVSR KRKAKNWEDE DFYDSDDDTF 

       430        440        450        460        470        480 
LDRTGLVEKK RLNRMKKAGK LDEKPETFES LVAKLNDAER ELAEISERLK SSSKVLSEPS 

       490        500        510        520        530 
SQDSLDAFMS EMKSGSTLDG VSRKKLHLRT FELRKEQQRL KGLIKLVKPA EIPELKK

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6 EMBL AAH72588.1.
Tissue: Brain EMBL AAH72588.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC072588 mRNA. Translation: AAH72588.1.
IPIIPI00117662.
UniGeneMm.352407.

3D structure databases

ProteinModelPortalQ6GQW1.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ6GQW1.

PTM databases

PhosphoSiteQ6GQW1.

Proteomic databases

PRIDEQ6GQW1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc008wyn.1. mouse.

Organism-specific databases

MGIMGI:1196608. Slc4a1ap.

Phylogenomic databases

HOGENOMHOG000008002.
HOVERGENHBG052984.
InParanoidQ6GQW1.

Gene expression databases

ArrayExpressQ6GQW1.
GenevestigatorQ6GQW1.

Family and domain databases

Gene3D2.60.200.20. 1 hit.
InterProIPR001159. Ds-RNA-bd.
IPR000253. FHA_dom.
IPR008984. SMAD_FHA_domain.
[Graphical view]
PfamPF00035. dsrm. 1 hit.
PF00498. FHA. 1 hit.
[Graphical view]
SMARTSM00240. FHA. 1 hit.
[Graphical view]
SUPFAMSSF49879. SMAD_FHA. 1 hit.
PROSITEPS50006. FHA_DOMAIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ6GQW1_MOUSE
AccessionPrimary (citable) accession number: Q6GQW1
Entry history
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: May 1, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info