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Protein
Submitted name:

MGC80529 protein

Gene

cdc27

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
MGC80529 proteinImported
Gene namesi
Name:cdc27Imported
Synonyms:MGC80529Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-972664. cdc27.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
NEK2P519552EBI-995003,EBI-633182From a different organism.

Protein-protein interaction databases

DIPiDIP-61882N.
IntActiQ6GQ04. 12 interactions.
MINTiMINT-8184443.

Structurei

3D structure databases

ProteinModelPortaliQ6GQ04.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini115 – 14834TPR_REGIONInterPro annotationAdd
BLAST
Domaini500 – 771272TPR_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatSAAS annotation, TPR repeatSAAS annotation

Phylogenomic databases

HOVERGENiHBG050859.
KOiK03350.

Family and domain databases

InterProiIPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00515. TPR_1. 1 hit.
PF13181. TPR_8. 2 hits.
[Graphical view]
SMARTiSM00028. TPR. 8 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiPS50005. TPR. 8 hits.
PS50293. TPR_REGION. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6GQ04-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVLQEPVQA AIWQALNHYA YRDAVFLAER LYAEVHSEEA LFLLATCYYR
60 70 80 90 100
SGKAYKAYRL LKAHSCTTPQ CKYLLAKCCV DLGKLAEGEQ ILSGGVLNKQ
110 120 130 140 150
KSQEEIVTEF GDSACFTLSL LGHVYCKTDR LAKGAECYQK SLSLNPFLWS
160 170 180 190 200
PFESLCEIGE KPDAEQTFKL TSLQSFSNCV PNTCTMTVNT HSVVQHRQPD
210 220 230 240 250
TVLMETPQDT IELNRLNLES SNIKYPLNSD SSISYIDPGV ISPDSLPLGT
260 270 280 290 300
GNAILSKQVQ NKPKTGRSLL GGPAALSPLT PSFGILPLET PSPGDGSYLQ
310 320 330 340 350
SYNSSCVLDV PSSGAPTKKS VARISQAGTK SVFSQSGNSR DVTPVLLVQT
360 370 380 390 400
QGSGPQTSTT PQVLSPTIAA PPNALPRRSS RLFTSDSSTT KENSKKLKMK
410 420 430 440 450
FPPKMPNRKT KSKTSKGGGT QTNLNDSLEI SKLDSSIISE GKISSVAPQI
460 470 480 490 500
QALTIQKAAA EGLMSLLRDM GKGYVALCSY NCKEAINILS HLPSHHYNTG
510 520 530 540 550
WVLCQIGRAY FELAEYLQAE RVFSEVRRIE SYRVEGMEIY STTLWHLQKD
560 570 580 590 600
VALSVLSKDL TDMDKNSPEA WCAAGNCFSL QREHDIAIKF FQRAIQVDPG
610 620 630 640 650
YAYAFTLLGH EFVLTEELDK ALACFRNSIR VNSRHYNAWY GLGMIYYKQE
660 670 680 690 700
KFSLAEMHFQ KALDINPQSS VLLCHIGVVQ HALKKSDKAL DTLNKAISID
710 720 730 740 750
PKNPLCKFHR ASILFANEKY KLALQELEEL KQIVPKESLV YFLIGKVYKK
760 770 780 790 800
LGQTHLALMN FSWAMDLDPK GANNQIKEAI DKRYLPDDEE AVTQEEQISE
810 820 830
CYPYESVATD ESQESSMTDA DDTQLHAAES DEF
Length:833
Mass (Da):92,381
Last modified:July 19, 2004 - v1
Checksum:iF3E4E06D8CB53604
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC072946 mRNA. Translation: AAH72946.1.
RefSeqiNP_001085568.1. NM_001092099.1.
UniGeneiXl.14864.

Genome annotation databases

GeneIDi443994.
KEGGixla:443994.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC072946 mRNA. Translation: AAH72946.1.
RefSeqiNP_001085568.1. NM_001092099.1.
UniGeneiXl.14864.

3D structure databases

ProteinModelPortaliQ6GQ04.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-61882N.
IntActiQ6GQ04. 12 interactions.
MINTiMINT-8184443.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi443994.
KEGGixla:443994.

Organism-specific databases

CTDi996.
XenbaseiXB-GENE-972664. cdc27.

Phylogenomic databases

HOVERGENiHBG050859.
KOiK03350.

Family and domain databases

InterProiIPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00515. TPR_1. 1 hit.
PF13181. TPR_8. 2 hits.
[Graphical view]
SMARTiSM00028. TPR. 8 hits.
[Graphical view]
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiPS50005. TPR. 8 hits.
PS50293. TPR_REGION. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6GQ04_XENLA
AccessioniPrimary (citable) accession number: Q6GQ04
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: September 7, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.