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Q6GPB4

- Q6GPB4_XENLA

UniProt

Q6GPB4 - Q6GPB4_XENLA

Protein
Submitted name:

MGC80553 protein

Gene

tsen2

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (19 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. nucleic acid binding Source: InterPro
    2. tRNA-intron endonuclease activity Source: InterPro

    GO - Biological processi

    1. tRNA splicing, via endonucleolytic cleavage and ligation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    MGC80553 proteinImported
    Gene namesi
    Name:tsen2Imported
    Synonyms:MGC80553Imported
    OrganismiXenopus laevis (African clawed frog)Imported
    Taxonomic identifieri8355 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

    Organism-specific databases

    XenbaseiXB-GENE-5907126. tsen2.

    Subcellular locationi

    GO - Cellular componenti

    1. tRNA-intron endonuclease complex Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliQ6GPB4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOVERGENiHBG056610.
    KOiK15322.

    Family and domain databases

    Gene3Di3.40.1350.10. 1 hit.
    InterProiIPR011856. tRNA_endonuc-like_dom.
    IPR006677. tRNA_intron_Endonuc_cat-like.
    IPR006678. tRNA_intron_Endonuc_N.
    IPR016589. tRNA_splic_SEN2.
    [Graphical view]
    PfamiPF01974. tRNA_int_endo. 1 hit.
    PF02778. tRNA_int_endo_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF011789. tRNA_splic_SEN2. 1 hit.
    SUPFAMiSSF53032. SSF53032. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q6GPB4-1 [UniParc]FASTAAdd to Basket

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    MSKATFHAPK RKRKVYESYE SPFPIPLAHD HSSRDFHICQ AEILNNHVIV    50
    RSTEDIELLY GKGYFGKGIL SRSRPQHSIA EQQLQSKWKD IKVNLPIISS 100
    RRYKLHLEWA KNLLEEQGLG TESINKILAD YTREVDISAE GDVVEENPPA 150
    ESRMDLDPEN GTKSQSSDSN PGKESEGKVF LEGNPEYDPL AKYGPEVLQE 200
    ERAEEEPDRN KLEKVHCPKH DDFILHCGCK PRRETLQNEL DSPARPHMEY 250
    LLVEEVQENV DLGPEGTEEN KGARGRGRLV CRRNPFRIFE YLQLSREEAF 300
    FLVYALGCLT ISYKKEPLTI QKLWEVFCAA QPSFSTKYLA YHHFRSKGWV 350
    PKVGLKYGTD LLLYRKGPPF YHASYSVIVE LVNDKGEGTP LRPLSWRSLA 400
    GLHRTTANVS KELLFCYLIK PAGFTDSDFI SPACIHRIKV QELIVSRWVS 450
    SRERMDHEEL 460
    Length:460
    Mass (Da):52,870
    Last modified:July 19, 2004 - v1
    Checksum:iEB3B8BEAF3262E10
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC073227 mRNA. Translation: AAH73227.1.
    RefSeqiNP_001085705.1. NM_001092236.1.
    UniGeneiXl.34894.

    Genome annotation databases

    GeneIDi444131.
    KEGGixla:444131.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC073227 mRNA. Translation: AAH73227.1 .
    RefSeqi NP_001085705.1. NM_001092236.1.
    UniGenei Xl.34894.

    3D structure databases

    ProteinModelPortali Q6GPB4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 444131.
    KEGGi xla:444131.

    Organism-specific databases

    CTDi 80746.
    Xenbasei XB-GENE-5907126. tsen2.

    Phylogenomic databases

    HOVERGENi HBG056610.
    KOi K15322.

    Family and domain databases

    Gene3Di 3.40.1350.10. 1 hit.
    InterProi IPR011856. tRNA_endonuc-like_dom.
    IPR006677. tRNA_intron_Endonuc_cat-like.
    IPR006678. tRNA_intron_Endonuc_N.
    IPR016589. tRNA_splic_SEN2.
    [Graphical view ]
    Pfami PF01974. tRNA_int_endo. 1 hit.
    PF02778. tRNA_int_endo_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF011789. tRNA_splic_SEN2. 1 hit.
    SUPFAMi SSF53032. SSF53032. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. NIH - Xenopus Gene Collection (XGC) project
      Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: SpleenImported.

    Entry informationi

    Entry nameiQ6GPB4_XENLA
    AccessioniPrimary (citable) accession number: Q6GPB4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 19, 2004
    Last sequence update: July 19, 2004
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)