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Q6GPB4

- Q6GPB4_XENLA

UniProt

Q6GPB4 - Q6GPB4_XENLA

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Protein
Submitted name: MGC80553 protein
Gene
tsen2, MGC80553
Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
  2. tRNA-intron endonuclease activity Source: InterPro

GO - Biological processi

  1. tRNA splicing, via endonucleolytic cleavage and ligation Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
MGC80553 proteinImported
Gene namesi
Name:tsen2Imported
Synonyms:MGC80553Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-5907126. tsen2.

Subcellular locationi

GO - Cellular componenti

  1. tRNA-intron endonuclease complex Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ6GPB4.

Family & Domainsi

Phylogenomic databases

HOVERGENiHBG056610.
KOiK15322.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
InterProiIPR011856. tRNA_endonuc-like_dom.
IPR006677. tRNA_intron_Endonuc_cat-like.
IPR006678. tRNA_intron_Endonuc_N.
IPR016589. tRNA_splic_SEN2.
[Graphical view]
PfamiPF01974. tRNA_int_endo. 1 hit.
PF02778. tRNA_int_endo_N. 1 hit.
[Graphical view]
PIRSFiPIRSF011789. tRNA_splic_SEN2. 1 hit.
SUPFAMiSSF53032. SSF53032. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6GPB4-1 [UniParc]FASTAAdd to Basket

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MSKATFHAPK RKRKVYESYE SPFPIPLAHD HSSRDFHICQ AEILNNHVIV    50
RSTEDIELLY GKGYFGKGIL SRSRPQHSIA EQQLQSKWKD IKVNLPIISS 100
RRYKLHLEWA KNLLEEQGLG TESINKILAD YTREVDISAE GDVVEENPPA 150
ESRMDLDPEN GTKSQSSDSN PGKESEGKVF LEGNPEYDPL AKYGPEVLQE 200
ERAEEEPDRN KLEKVHCPKH DDFILHCGCK PRRETLQNEL DSPARPHMEY 250
LLVEEVQENV DLGPEGTEEN KGARGRGRLV CRRNPFRIFE YLQLSREEAF 300
FLVYALGCLT ISYKKEPLTI QKLWEVFCAA QPSFSTKYLA YHHFRSKGWV 350
PKVGLKYGTD LLLYRKGPPF YHASYSVIVE LVNDKGEGTP LRPLSWRSLA 400
GLHRTTANVS KELLFCYLIK PAGFTDSDFI SPACIHRIKV QELIVSRWVS 450
SRERMDHEEL 460
Length:460
Mass (Da):52,870
Last modified:July 19, 2004 - v1
Checksum:iEB3B8BEAF3262E10
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC073227 mRNA. Translation: AAH73227.1.
RefSeqiNP_001085705.1. NM_001092236.1.
UniGeneiXl.34894.

Genome annotation databases

GeneIDi444131.
KEGGixla:444131.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC073227 mRNA. Translation: AAH73227.1 .
RefSeqi NP_001085705.1. NM_001092236.1.
UniGenei Xl.34894.

3D structure databases

ProteinModelPortali Q6GPB4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 444131.
KEGGi xla:444131.

Organism-specific databases

CTDi 80746.
Xenbasei XB-GENE-5907126. tsen2.

Phylogenomic databases

HOVERGENi HBG056610.
KOi K15322.

Family and domain databases

Gene3Di 3.40.1350.10. 1 hit.
InterProi IPR011856. tRNA_endonuc-like_dom.
IPR006677. tRNA_intron_Endonuc_cat-like.
IPR006678. tRNA_intron_Endonuc_N.
IPR016589. tRNA_splic_SEN2.
[Graphical view ]
Pfami PF01974. tRNA_int_endo. 1 hit.
PF02778. tRNA_int_endo_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF011789. tRNA_splic_SEN2. 1 hit.
SUPFAMi SSF53032. SSF53032. 1 hit.
ProtoNeti Search...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: SpleenImported.

Entry informationi

Entry nameiQ6GPB4_XENLA
AccessioniPrimary (citable) accession number: Q6GPB4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: April 16, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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