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Q6GPB4 (Q6GPB4_XENLA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:tsen2 Xenbase XB-GENE-5907126
Synonyms:MGC80553 EMBL AAH73227.1
OrganismXenopus laevis (African clawed frog) EMBL AAH73227.1
Taxonomic identifier8355 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q6GPB4 [UniParc].

Last modified July 19, 2004. Version 1.
Checksum: EB3B8BEAF3262E10

FASTA46052,870
        10         20         30         40         50         60 
MSKATFHAPK RKRKVYESYE SPFPIPLAHD HSSRDFHICQ AEILNNHVIV RSTEDIELLY 

        70         80         90        100        110        120 
GKGYFGKGIL SRSRPQHSIA EQQLQSKWKD IKVNLPIISS RRYKLHLEWA KNLLEEQGLG 

       130        140        150        160        170        180 
TESINKILAD YTREVDISAE GDVVEENPPA ESRMDLDPEN GTKSQSSDSN PGKESEGKVF 

       190        200        210        220        230        240 
LEGNPEYDPL AKYGPEVLQE ERAEEEPDRN KLEKVHCPKH DDFILHCGCK PRRETLQNEL 

       250        260        270        280        290        300 
DSPARPHMEY LLVEEVQENV DLGPEGTEEN KGARGRGRLV CRRNPFRIFE YLQLSREEAF 

       310        320        330        340        350        360 
FLVYALGCLT ISYKKEPLTI QKLWEVFCAA QPSFSTKYLA YHHFRSKGWV PKVGLKYGTD 

       370        380        390        400        410        420 
LLLYRKGPPF YHASYSVIVE LVNDKGEGTP LRPLSWRSLA GLHRTTANVS KELLFCYLIK 

       430        440        450        460 
PAGFTDSDFI SPACIHRIKV QELIVSRWVS SRERMDHEEL 

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References

[1]NIH - Xenopus Gene Collection (XGC) project
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Spleen EMBL AAH73227.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC073227 mRNA. Translation: AAH73227.1.
RefSeqNP_001085705.1. NM_001092236.1.
UniGeneXl.34894.

3D structure databases

ProteinModelPortalQ6GPB4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID444131.
KEGGxla:444131.

Organism-specific databases

CTD80746.
XenbaseXB-GENE-5907126. tsen2.

Phylogenomic databases

HOVERGENHBG056610.
KOK15322.

Family and domain databases

Gene3D3.40.1350.10. 1 hit.
InterProIPR011856. tRNA_endonuc-like_dom.
IPR006677. tRNA_intron_Endonuc_cat-like.
IPR006678. tRNA_intron_Endonuc_N.
IPR016589. tRNA_splic_SEN2.
[Graphical view]
PfamPF01974. tRNA_int_endo. 1 hit.
PF02778. tRNA_int_endo_N. 1 hit.
[Graphical view]
PIRSFPIRSF011789. tRNA_splic_SEN2. 1 hit.
SUPFAMSSF53032. SSF53032. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ6GPB4_XENLA
AccessionPrimary (citable) accession number: Q6GPB4
Entry history
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: April 16, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)