Q6GPB4 (Q6GPB4_XENLA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
MGC80553 protein EMBL AAH73227.1

Gene names

Name:	tsen2 Xenbase XB-GENE-5907126
Synonyms:	MGC80553 EMBL AAH73227.1

Organism

Xenopus laevis (African clawed frog) EMBL AAH73227.1

Taxonomic identifier

8355 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Xenopus

Protein attributes

Sequence length	460 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC tRNA splicing, via endonucleolytic cleavage and ligation Inferred from electronic annotation. Source: InterPro
Cellular_component	tRNA-intron endonuclease complex Inferred from electronic annotation. Source: InterPro
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro tRNA-intron endonuclease activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6GPB4 [UniParc]. Last modified July 19, 2004. Version 1. Checksum: EB3B8BEAF3262E10	FASTA	460	52,870
	10 20 30 40 50 60 MSKATFHAPK RKRKVYESYE SPFPIPLAHD HSSRDFHICQ AEILNNHVIV RSTEDIELLY 70 80 90 100 110 120 GKGYFGKGIL SRSRPQHSIA EQQLQSKWKD IKVNLPIISS RRYKLHLEWA KNLLEEQGLG 130 140 150 160 170 180 TESINKILAD YTREVDISAE GDVVEENPPA ESRMDLDPEN GTKSQSSDSN PGKESEGKVF 190 200 210 220 230 240 LEGNPEYDPL AKYGPEVLQE ERAEEEPDRN KLEKVHCPKH DDFILHCGCK PRRETLQNEL 250 260 270 280 290 300 DSPARPHMEY LLVEEVQENV DLGPEGTEEN KGARGRGRLV CRRNPFRIFE YLQLSREEAF 310 320 330 340 350 360 FLVYALGCLT ISYKKEPLTI QKLWEVFCAA QPSFSTKYLA YHHFRSKGWV PKVGLKYGTD 370 380 390 400 410 420 LLLYRKGPPF YHASYSVIVE LVNDKGEGTP LRPLSWRSLA GLHRTTANVS KELLFCYLIK 430 440 450 460 PAGFTDSDFI SPACIHRIKV QELIVSRWVS SRERMDHEEL

References

[1]	NIH - Xenopus Gene Collection (XGC) project Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Spleen EMBL AAH73227.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC073227 mRNA. Translation: AAH73227.1.
RefSeq	NP_001085705.1. NM_001092236.1.
UniGene	Xl.34894.
3D structure databases
ProteinModelPortal	Q6GPB4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	444131.
KEGG	xla:444131.
Organism-specific databases
CTD	80746.
Xenbase	XB-GENE-5907126. tsen2.
Phylogenomic databases
HOVERGEN	HBG056610.
KO	K15322.
Family and domain databases
Gene3D	3.40.1350.10. 1 hit.
InterPro	IPR011856. tRNA_endonuc-like_dom. IPR006677. tRNA_intron_Endonuc_cat-like. IPR006678. tRNA_intron_Endonuc_N. IPR016589. tRNA_splic_SEN2. [Graphical view]
Pfam	PF01974. tRNA_int_endo. 1 hit. PF02778. tRNA_int_endo_N. 1 hit. [Graphical view]
PIRSF	PIRSF011789. tRNA_splic_SEN2. 1 hit.
SUPFAM	SSF53032. tRNA_int_endo_C. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6GPB4_XENLA

Accession

Primary (citable) accession number: Q6GPB4

Entry history

Integrated into UniProtKB/TrEMBL:	July 19, 2004
Last sequence update:	July 19, 2004
Last modified:	March 6, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)