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Protein
Submitted name:

MGC83001 protein

Gene

cox4i1

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
MGC83001 proteinImported
Gene namesi
Name:cox4i1Imported
Synonyms:MGC83001Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-953654. cox4i1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei102 – 12019HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ6GN62.
SMRiQ6GN62. Positions 27-169.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOVERGENiHBG051087.
KOiK02263.

Family and domain databases

Gene3Di1.10.442.10. 1 hit.
InterProiIPR013288. Cyt_c_oxidase_su4.
IPR004203. Cyt_c_oxidase_su4_fam.
[Graphical view]
PANTHERiPTHR10707. PTHR10707. 1 hit.
PfamiPF02936. COX4. 1 hit.
[Graphical view]
PRINTSiPR01873. CYTCOXIDASE4.
SUPFAMiSSF81406. SSF81406. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6GN62-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSSRVLSLV GKRALSTSVC LQGHAGVATP DTYSLPIYVD RRDVPLPDIA
60 70 80 90 100
FVDTLSVEQK ALKDKEKGAW ASLSSKEKLD LYRIKFHESY TEMNQGSSEW
110 120 130 140 150
KTILGGTLFF IGFTAFVVLW QRKYVYGDVP HTFSEDWVAM QTKRMLDMRI
160
NPVQGFSSQW DYDKKEWKK
Length:169
Mass (Da):19,411
Last modified:July 19, 2004 - v1
Checksum:i2CF123DBCCE49F9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC073656 mRNA. Translation: AAH73656.1.
RefSeqiNP_001085991.1. NM_001092522.1.
UniGeneiXl.48853.

Genome annotation databases

GeneIDi444420.
KEGGixla:444420.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC073656 mRNA. Translation: AAH73656.1.
RefSeqiNP_001085991.1. NM_001092522.1.
UniGeneiXl.48853.

3D structure databases

ProteinModelPortaliQ6GN62.
SMRiQ6GN62. Positions 27-169.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi444420.
KEGGixla:444420.

Organism-specific databases

CTDi1327.
XenbaseiXB-GENE-953654. cox4i1.

Phylogenomic databases

HOVERGENiHBG051087.
KOiK02263.

Family and domain databases

Gene3Di1.10.442.10. 1 hit.
InterProiIPR013288. Cyt_c_oxidase_su4.
IPR004203. Cyt_c_oxidase_su4_fam.
[Graphical view]
PANTHERiPTHR10707. PTHR10707. 1 hit.
PfamiPF02936. COX4. 1 hit.
[Graphical view]
PRINTSiPR01873. CYTCOXIDASE4.
SUPFAMiSSF81406. SSF81406. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: EmbryoImported.

Entry informationi

Entry nameiQ6GN62_XENLA
AccessioniPrimary (citable) accession number: Q6GN62
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: December 9, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.