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Protein
Submitted name:

Zgc:91942

Gene

hdac11

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hydrolase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Zgc:91942Imported
Submitted name:
Zgc:91942 proteinImported
Gene namesi
Name:hdac11Imported
Synonyms:zgc:91942Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-040704-7. hdac11.

Expressioni

Gene expression databases

BgeeiQ6GMJ4.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000054334.

Structurei

3D structure databases

ProteinModelPortaliQ6GMJ4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0123.
HOGENOMiHOG000280018.
HOVERGENiHBG051893.
KOiK11418.
PhylomeDBiQ6GMJ4.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.

Sequencei

Sequence statusi: Complete.

Q6GMJ4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKKEDSGGK KCSHHTELYA EVPASCLPIV YSPEYNITFM GLEKLHPFDA
60 70 80 90 100
GKWGKVIRFL KEEQFITDEI IVLAREASEA DLLVVHTARY LNRLKWSLVV
110 120 130 140 150
ATITEIPPLL FLPNFLVQRK VLRPLRTQTG GTIMAGKLAI DRGWAINVGG
160 170 180 190 200
GFHHCSSDKG GGFCAYADIT LAIKFLFERV EGVASATIID LDAHQGNGHE
210 220 230 240 250
RDFLEDRRVY IMDVYNRHIY PGDGYAKRAI KRKVELDWGT EDSEYLQKVD
260 270 280 290 300
LHSEGALNEA RPDIIIYNAG TDILDGDPLG GLAISPQGII KRDEIIFRAA
310 320 330 340 350
RRRGIPILMV TSGGYQKKTA RIIADSILNL HRQGLIGEEA LDVAGPSHVS
360
LMMSKSVSSG ATLAAI
Length:366
Mass (Da):40,440
Last modified:July 19, 2004 - v1
Checksum:iC8BD43C86AF899C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC074052 mRNA. Translation: AAH74052.1.
BC165866 mRNA. Translation: AAI65866.1.
RefSeqiNP_001002171.1. NM_001002171.1.
UniGeneiDr.14148.

Genome annotation databases

GeneIDi431718.
KEGGidre:431718.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC074052 mRNA. Translation: AAH74052.1.
BC165866 mRNA. Translation: AAI65866.1.
RefSeqiNP_001002171.1. NM_001002171.1.
UniGeneiDr.14148.

3D structure databases

ProteinModelPortaliQ6GMJ4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7955.ENSDARP00000054334.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi431718.
KEGGidre:431718.

Organism-specific databases

CTDi79885.
ZFINiZDB-GENE-040704-7. hdac11.

Phylogenomic databases

eggNOGiCOG0123.
HOGENOMiHOG000280018.
HOVERGENiHBG051893.
KOiK11418.
PhylomeDBiQ6GMJ4.

Miscellaneous databases

NextBioi20830954.

Gene expression databases

BgeeiQ6GMJ4.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PRINTSiPR01270. HDASUPER.
ProtoNetiSearch...

Publicationsi

  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: WholeImported.
  2. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: PCR rescueImported.

Entry informationi

Entry nameiQ6GMJ4_DANRE
AccessioniPrimary (citable) accession number: Q6GMJ4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: February 4, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.