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Q6GL17

- Q6GL17_XENTR

UniProt

Q6GL17 - Q6GL17_XENTR

Protein
Submitted name:

MGC69225 protein

Gene

idh1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 69 (01 Oct 2014)
      Sequence version 1 (19 Jul 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. isocitrate dehydrogenase (NADP+) activity Source: InterPro

    GO - Biological processi

    1. isocitrate metabolic process Source: InterPro

    Enzyme and pathway databases

    ReactomeiREACT_202740. NADPH regeneration.
    REACT_214928. Abnormal conversion of 2-oxoglutarate to 2-hydroxyglutarate.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    MGC69225 proteinImported
    Gene namesi
    Name:idh1Imported
    Synonyms:MGC69225Imported
    OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
    Taxonomic identifieri8364 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

    Organism-specific databases

    XenbaseiXB-GENE-1004994. idh1.

    PTM / Processingi

    Proteomic databases

    PaxDbiQ6GL17.

    Expressioni

    Gene expression databases

    BgeeiQ6GL17.

    Interactioni

    Protein-protein interaction databases

    STRINGi8364.ENSXETP00000017597.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6GL17.
    SMRiQ6GL17. Positions 1-284.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0538.
    HOGENOMiHOG000019858.
    HOVERGENiHBG006119.
    InParanoidiQ6GL17.
    KOiK00031.

    Family and domain databases

    Gene3Di3.40.718.10. 1 hit.
    InterProiIPR004790. Isocitrate_DH_NADP.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view]
    PANTHERiPTHR11822. PTHR11822. 1 hit.
    PfamiPF00180. Iso_dh. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00127. nadp_idh_euk. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q6GL17-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSKKINGGSV VEMQGDEMTR VIWDLIKEKL ILPYVELDLH CYDLGIENRD    50
    ATDDQVTVDA AEAIKKYNVG IKCATITPDE KRVEEFNLKQ MWKSPNGTIR 100
    NILGGTVFRE AIICKNIPRL VSGWVKPIII GRHAYGDQYR ATDFVVPGPG 150
    KVEISFTPKD GGEAIKYVIH NFEDCGGVAL GMYNTDQSIR DFAHSSFQMA 200
    LSKSWPLYMS TKNTILKKYD GRFKDIFQEI YEKDYKSQFE EKKIWYEHRL 250
    IDDMVAQAMK SEGGFIWACK NYDGDVQSDS VAQG 284
    Length:284
    Mass (Da):32,326
    Last modified:July 19, 2004 - v1
    Checksum:i28302B9D9E75CB9E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC074702 mRNA. Translation: AAH74702.1.
    RefSeqiNP_001004863.1. NM_001004863.1.
    UniGeneiStr.17063.

    Genome annotation databases

    GeneIDi448164.
    KEGGixtr:448164.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC074702 mRNA. Translation: AAH74702.1 .
    RefSeqi NP_001004863.1. NM_001004863.1.
    UniGenei Str.17063.

    3D structure databases

    ProteinModelPortali Q6GL17.
    SMRi Q6GL17. Positions 1-284.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 8364.ENSXETP00000017597.

    Proteomic databases

    PaxDbi Q6GL17.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 448164.
    KEGGi xtr:448164.

    Organism-specific databases

    CTDi 3417.
    Xenbasei XB-GENE-1004994. idh1.

    Phylogenomic databases

    eggNOGi COG0538.
    HOGENOMi HOG000019858.
    HOVERGENi HBG006119.
    InParanoidi Q6GL17.
    KOi K00031.

    Enzyme and pathway databases

    Reactomei REACT_202740. NADPH regeneration.
    REACT_214928. Abnormal conversion of 2-oxoglutarate to 2-hydroxyglutarate.

    Gene expression databases

    Bgeei Q6GL17.

    Family and domain databases

    Gene3Di 3.40.718.10. 1 hit.
    InterProi IPR004790. Isocitrate_DH_NADP.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view ]
    PANTHERi PTHR11822. PTHR11822. 1 hit.
    Pfami PF00180. Iso_dh. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00127. nadp_idh_euk. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. NIH - Xenopus Gene Collection (XGC) project
      Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: EmbryoImported.

    Entry informationi

    Entry nameiQ6GL17_XENTR
    AccessioniPrimary (citable) accession number: Q6GL17
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 19, 2004
    Last sequence update: July 19, 2004
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)