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Q6GL17

- Q6GL17_XENTR

UniProt

Q6GL17 - Q6GL17_XENTR

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Protein
Submitted name:

MGC69225 protein

Gene

idh1

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. isocitrate dehydrogenase (NADP+) activity Source: InterPro

GO - Biological processi

  1. isocitrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_202740. NADPH regeneration.
REACT_214928. Abnormal conversion of 2-oxoglutarate to 2-hydroxyglutarate.

Names & Taxonomyi

Protein namesi
Submitted name:
MGC69225 proteinImported
Gene namesi
Name:idh1Imported
Synonyms:MGC69225Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-1004994. idh1.

PTM / Processingi

Proteomic databases

PaxDbiQ6GL17.

Expressioni

Gene expression databases

BgeeiQ6GL17.
ExpressionAtlasiQ6GL17. baseline.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000017597.

Structurei

3D structure databases

ProteinModelPortaliQ6GL17.
SMRiQ6GL17. Positions 1-284.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0538.
HOGENOMiHOG000019858.
HOVERGENiHBG006119.
KOiK00031.

Family and domain databases

Gene3Di3.40.718.10. 1 hit.
InterProiIPR004790. Isocitrate_DH_NADP.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERiPTHR11822. PTHR11822. 1 hit.
PfamiPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00127. nadp_idh_euk. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6GL17-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSKKINGGSV VEMQGDEMTR VIWDLIKEKL ILPYVELDLH CYDLGIENRD
60 70 80 90 100
ATDDQVTVDA AEAIKKYNVG IKCATITPDE KRVEEFNLKQ MWKSPNGTIR
110 120 130 140 150
NILGGTVFRE AIICKNIPRL VSGWVKPIII GRHAYGDQYR ATDFVVPGPG
160 170 180 190 200
KVEISFTPKD GGEAIKYVIH NFEDCGGVAL GMYNTDQSIR DFAHSSFQMA
210 220 230 240 250
LSKSWPLYMS TKNTILKKYD GRFKDIFQEI YEKDYKSQFE EKKIWYEHRL
260 270 280
IDDMVAQAMK SEGGFIWACK NYDGDVQSDS VAQG
Length:284
Mass (Da):32,326
Last modified:July 19, 2004 - v1
Checksum:i28302B9D9E75CB9E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC074702 mRNA. Translation: AAH74702.1.
RefSeqiNP_001004863.1. NM_001004863.1.
UniGeneiStr.17063.

Genome annotation databases

GeneIDi448164.
KEGGixtr:448164.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC074702 mRNA. Translation: AAH74702.1 .
RefSeqi NP_001004863.1. NM_001004863.1.
UniGenei Str.17063.

3D structure databases

ProteinModelPortali Q6GL17.
SMRi Q6GL17. Positions 1-284.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 8364.ENSXETP00000017597.

Proteomic databases

PaxDbi Q6GL17.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 448164.
KEGGi xtr:448164.

Organism-specific databases

CTDi 3417.
Xenbasei XB-GENE-1004994. idh1.

Phylogenomic databases

eggNOGi COG0538.
HOGENOMi HOG000019858.
HOVERGENi HBG006119.
KOi K00031.

Enzyme and pathway databases

Reactomei REACT_202740. NADPH regeneration.
REACT_214928. Abnormal conversion of 2-oxoglutarate to 2-hydroxyglutarate.

Gene expression databases

Bgeei Q6GL17.
ExpressionAtlasi Q6GL17. baseline.

Family and domain databases

Gene3Di 3.40.718.10. 1 hit.
InterProi IPR004790. Isocitrate_DH_NADP.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
PANTHERi PTHR11822. PTHR11822. 1 hit.
Pfami PF00180. Iso_dh. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00127. nadp_idh_euk. 1 hit.
ProtoNeti Search...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: EmbryoImported.

Entry informationi

Entry nameiQ6GL17_XENTR
AccessioniPrimary (citable) accession number: Q6GL17
Entry historyi
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: October 29, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)