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Q6GL17 (Q6GL17_XENTR) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
MGC69225 protein EMBL AAH74702.1
Gene names
Name:idh1 Xenbase XB-GENE-1004994
Synonyms:MGC69225 EMBL AAH74702.1
OrganismXenopus tropicalis (Western clawed frog) (Silurana tropicalis) EMBL AAH74702.1
Taxonomic identifier8364 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Ontologies

Gene Ontology (GO)
   Biological_processisocitrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionisocitrate dehydrogenase (NADP+) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6GL17 [UniParc].

Last modified July 19, 2004. Version 1.
Checksum: 28302B9D9E75CB9E

FASTA28432,326
        10         20         30         40         50         60 
MSKKINGGSV VEMQGDEMTR VIWDLIKEKL ILPYVELDLH CYDLGIENRD ATDDQVTVDA 

        70         80         90        100        110        120 
AEAIKKYNVG IKCATITPDE KRVEEFNLKQ MWKSPNGTIR NILGGTVFRE AIICKNIPRL 

       130        140        150        160        170        180 
VSGWVKPIII GRHAYGDQYR ATDFVVPGPG KVEISFTPKD GGEAIKYVIH NFEDCGGVAL 

       190        200        210        220        230        240 
GMYNTDQSIR DFAHSSFQMA LSKSWPLYMS TKNTILKKYD GRFKDIFQEI YEKDYKSQFE 

       250        260        270        280 
EKKIWYEHRL IDDMVAQAMK SEGGFIWACK NYDGDVQSDS VAQG

« Hide

References

[1]NIH - Xenopus Gene Collection (XGC) project
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryo EMBL AAH74702.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC074702 mRNA. Translation: AAH74702.1.
RefSeqNP_001004863.1. NM_001004863.1.
UniGeneStr.17063.

3D structure databases

ProteinModelPortalQ6GL17.
SMRQ6GL17. Positions 1-284.
ModBaseSearch...

Protein-protein interaction databases

STRING8364.ENSXETP00000017597.
Q6GL17.

Proteomic databases

PaxDbQ6GL17.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID448164.
KEGGxtr:448164.

Organism-specific databases

CTD3417.
XenbaseXB-GENE-1004994. idh1.

Phylogenomic databases

eggNOGCOG0538.
HOGENOMHOG000019858.
HOVERGENHBG006119.
InParanoidQ6GL17.
KOK00031.
OrthoDBEOG47M1Z0.

Gene expression databases

BgeeQ6GL17.

Family and domain databases

Gene3D3.40.718.10. 1 hit.
InterProIPR004790. Isocitrate_DH_NADP.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11822. PTHR11822. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsTIGR00127. nadp_idh_euk. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ6GL17_XENTR
AccessionPrimary (citable) accession number: Q6GL17
Entry history
Integrated into UniProtKB/TrEMBL: July 19, 2004
Last sequence update: July 19, 2004
Last modified: April 3, 2013
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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