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Protein

Uncharacterized HTH-type transcriptional regulator SAS0078

Gene

SAS0078

Organism
Staphylococcus aureus (strain MSSA476)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi161 – 180H-T-H motifPROSITE-ProRule annotationAdd BLAST20
DNA bindingi210 – 233H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciSAUR282459:G13EH-75-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator SAS0078
Gene namesi
Ordered Locus Names:SAS0078
OrganismiStaphylococcus aureus (strain MSSA476)
Taxonomic identifieri282459 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001946311 – 745Uncharacterized HTH-type transcriptional regulator SAS0078Add BLAST745

Structurei

3D structure databases

ProteinModelPortaliQ6GD21.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 2 HTH araC/xylS-type DNA-binding domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

HOGENOMiHOG000279705.
OMAiCANINPR.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
2.60.120.280. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR003313. AraC-bd.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR020449. Tscrpt_reg_HTH_AraC-type.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
[Graphical view]
PRINTSiPR00032. HTHARAC.
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF51215. SSF51215. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6GD21-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQRDYLIRVE TESMPDFKRL NGLMIGFVIK GEAHIYDENN MTQCNSGDIF
60 70 80 90 100
IINHRDLYRF QLQQDGIICY IQFQMKYLAD KFDDAHCLYF HLTDATTTKN
110 120 130 140 150
IHQLRNIMAR LVSTHIRHNE LSKLTEQQLV IQLLMHMIHY VPRTYHSNQS
160 170 180 190 200
ILNDDKVNQV CDYIELHFHE DLSLSELSEY VGWSESHLSK KFTESLGVGF
210 220 230 240 250
QHFLNTTRIE HAKLDLTYTD ETITDIALQN GFSSAASFAR TFKHFTHQTP
260 270 280 290 300
KQYRGDRPAI TENQQSAQHN YHDRELILLL NDYIEEMNHF IEDIEKMNYK
310 320 330 340 350
EIAFKPTNQQ LNQFNHIIQV GYLRNLLNTQ YQSQLLTCHH DFQVNEVLAY
360 370 380 390 400
DVMPYIMKKL NAPFTYDAEI SNIFYDIDLC LDFLLDHNFS LTMHLNQYDS
410 420 430 440 450
RDYIDAFKVF IHHVALHVSH RKDLKFNLYV TTLHNALIEM IDYFKALFPN
460 470 480 490 500
GGLYIHLDQA TERHLPLLKR LEPHIDHFVF DANSNDAVDF NKMNDDEFKT
510 520 530 540 550
ASQMIINKTN YFIDLIHRHN LKRPLILLNW NTLTGDTFIT NGEYFRGGII
560 570 580 590 600
IEQLLKLSSK VEGIGYWLNY DLHVSHCKNE RDYMNSIELF HQYNGKRPVY
610 620 630 640 650
FTALLFNKLT SNILYSDDTC IVTGTDSNFQ ILLYDAKHFN PYLALDNQMN
660 670 680 690 700
MRATEMIHLN INALEEGMYK IKHFTLDKEN GALFNLWRKH HTIHGMDKDS
710 720 730 740
IDYVNRMSFP KLEVYDIDIT DTLALNIKMI TNGIHLIEVK RYPSS
Length:745
Mass (Da):87,864
Last modified:July 19, 2004 - v1
Checksum:iE62BD00F69062A55
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571857 Genomic DNA. Translation: CAG41845.1.
RefSeqiWP_001188468.1. NC_002953.3.

Genome annotation databases

KEGGisas:SAS0078.
PATRICi19549486. VBIStaAur96780_0081.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX571857 Genomic DNA. Translation: CAG41845.1.
RefSeqiWP_001188468.1. NC_002953.3.

3D structure databases

ProteinModelPortaliQ6GD21.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGisas:SAS0078.
PATRICi19549486. VBIStaAur96780_0081.

Phylogenomic databases

HOGENOMiHOG000279705.
OMAiCANINPR.

Enzyme and pathway databases

BioCyciSAUR282459:G13EH-75-MONOMER.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
2.60.120.280. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR003313. AraC-bd.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
IPR020449. Tscrpt_reg_HTH_AraC-type.
[Graphical view]
PfamiPF12833. HTH_18. 1 hit.
[Graphical view]
PRINTSiPR00032. HTHARAC.
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF51215. SSF51215. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY078_STAAS
AccessioniPrimary (citable) accession number: Q6GD21
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: July 19, 2004
Last modified: November 2, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.