Q6G598 (Q6G598_BARHE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Integration host factor subunit beta RuleBase RU003941

Gene names

Name:	ihfB EMBL CAF26830.1
Ordered Locus Names:	BH00140

Organism

Bartonella henselae (strain ATCC 49882 / Houston 1) (Rochalimaea henselae) [Complete proteome] [HAMAP]

Taxonomic identifier

283166 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bartonellaceae › Bartonella

Protein attributes

Sequence length	92 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control By similarity. RuleBase RU003941 SAAS SAAS005685
Subunit structure	Heterodimer of an alpha and a beta chain By similarity. RuleBase RU003941 SAAS SAAS005685
Sequence similarities	Belongs to the bacterial histone-like protein family. RuleBase RU003939

Ontologies

Keywords
Biological process	DNA recombination RuleBase RU003941 SAAS SAAS005685 Transcription Transcription regulation RuleBase RU003941 SAAS SAAS005685 Translation regulation RuleBase RU003941 SAAS SAAS005685
Ligand	DNA-binding RuleBase RU003941 SAAS SAAS005685
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA recombination Inferred from electronic annotation. Source: UniProtKB-KW regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW regulation of translation Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	chromosome Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6G598 [UniParc]. Last modified July 19, 2004. Version 1. Checksum: 1B37F9EAF8FEBF70	FASTA	92	10,551
	10 20 30 40 50 60 MVKSELVQII ARHNPHLFQR DVENIVNAIF EEISTALVNG NRVELRGFGA FSVKSRSARN 70 80 90 GRNPRTGEAV MVEEKWIPFF KTGKDLRDRL NQ

References

[1]

"The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae." Alsmark U.C.M., Frank A.C., Karlberg E.O., Legault B.-A., Ardell D.H., Canbaeck B., Eriksson A.-S., Naeslund A.K., Handley S.A., Huvet M., La Scola B., Holmberg M., Andersson S.G.E. Proc. Natl. Acad. Sci. U.S.A. 101:9716-9721(2004) [PubMed: 15210978] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49882 / Houston 1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX897699 Genomic DNA. Translation: CAF26830.1.
RefSeq	YP_032886.1. NC_005956.1.
3D structure databases
ProteinModelPortal	Q6G598.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2865552.
GenomeReviews	Gene locus BH00140 in contig BX897699_GR.
KEGG	bhe:BH00140.
NMPDR	fig|283166.1.peg.14.
PATRIC	20543707. VBIBarHen29080_0014.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG705085.
OMA	VKRRDAR.
PhylomeDB	Q6G598.
ProtClustDB	PRK00199.
Family and domain databases
InterPro	IPR023630. DNA-bd_HU/IHF. IPR000119. Hist_DNA-bd_bac. IPR020816. Histone-like_DNA-bd_CS. IPR010992. IHF-like_DNA-bd. IPR005685. IHF_beta. [Graphical view]
Gene3D	G3DSA:4.10.520.10. Hist_DNA_bd_bac. 1 hit.
KO	K05788.
Pfam	PF00216. Bac_DNA_binding. 1 hit. [Graphical view]
PRINTS	PR01727. DNABINDINGHU.
SMART	SM00411. BHL. 1 hit. [Graphical view]
SUPFAM	SSF47729. IHF_like_DNA_bnd. 1 hit.
TIGRFAMs	TIGR00988. Hip. 1 hit.
PROSITE	PS00045. HISTONE_LIKE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6G598_BARHE

Accession

Primary (citable) accession number: Q6G598

Entry history

Integrated into UniProtKB/TrEMBL:	July 19, 2004
Last sequence update:	July 19, 2004
Last modified:	January 25, 2012
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)