Q6G3I4 (Q6G3I4_BARHE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA gyrase subunit B EMBL CAF27584.1

Gene names

Name:	parE EMBL CAF27584.1
Ordered Locus Names:	BH07840

Organism

Bartonella henselae (strain ATCC 49882 / Houston 1) (Rochalimaea henselae) [Complete proteome] [HAMAP]

Taxonomic identifier

283166 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bartonellaceae › Bartonella

Protein attributes

Sequence length	685 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the type II topoisomerase family. RuleBase RU000380

Ontologies

Keywords
Ligand	ATP-binding RuleBase RU000380 SAAS SAAS002288 Nucleotide-binding
Molecular function	Isomerase Topoisomerase SAAS SAAS002288 RuleBase RU000380
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA topological change Inferred from electronic annotation. Source: InterPro
Cellular component	chromosome Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW DNA topoisomerase (ATP-hydrolyzing) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6G3I4 [UniParc]. Last modified July 19, 2004. Version 1. Checksum: 7DF850F4DD4F2C3F	FASTA	685	76,507
	10 20 30 40 50 60 MSDKNKDLFS ILNNAQFSIN IKEKNLSPSL SSEAANSRKD TQENDYNALS IRVLEGLEPV 70 80 90 100 110 120 RLRPGMYIGG TDSKALHHLF AEIIDNAMDE AVAGYADFID VSLEKNGYLT VTDNGRGIPV 130 140 150 160 170 180 ENHPQMPGKS TLEVIMTQLH SGGKFDGKAY QTAGGLHGVG ISVVNALSDY MEVEVARERK 190 200 210 220 230 240 LYRQRFSRGI PQSGLEDLGD VYNRRGTRVR FHPDSKIFGE KAAFDPEKIY KMARSKAYLF 250 260 270 280 290 300 GGVKIRWNCD PVLLENTKNI PEKAVFHFPD GLKDYLLSSL KDEYRVTSEI FSGKTKHSNG 310 320 330 340 350 360 HGSVEWAIAW HGGDSHVQSY CNTIPTGEGG THEMGLRQAL LRGLKSYAEL IGNKRAAIIT 370 380 390 400 410 420 SDDVMISTSA ILSVFIKDPE FVGQTKDRLA TIEAQRIVEN AIRDPFDHWL TNSPQESTKL 430 440 450 460 470 480 LDWVVERAEE RVRRRQDREI NRKTAVRKLR LPGKLADCSQ NCAAGAELFI VEGDSAGGSA 490 500 510 520 530 540 KQARNRANQA ILPLRGKILN VASAAHEKMN SSQTIGDLIL ALGCGTRSKY REKDLRYERI 550 560 570 580 590 600 IIMTDADVDG AHIASLLITF FFQEMPDLIR QGHLYLAVPP LYRISQGGKV AYARDDTHKD 610 620 630 640 650 660 ELLKTEFTGK AKIEIGRFKG LGEMRAEQLK ETTMHPQKRT LLRVSINAEE VQETKNTVES 670 680 LMGTKPEARF RFIQENSTFA SNLDI

References

[1]

"The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae." Alsmark U.C.M., Frank A.C., Karlberg E.O., Legault B.-A., Ardell D.H., Canbaeck B., Eriksson A.-S., Naeslund A.K., Handley S.A., Huvet M., La Scola B., Holmberg M., Andersson S.G.E. Proc. Natl. Acad. Sci. U.S.A. 101:9716-9721(2004) [PubMed: 15210978] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49882 / Houston 1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX897699 Genomic DNA. Translation: CAF27584.1.
RefSeq	YP_033595.1. NC_005956.1.
3D structure databases
ProteinModelPortal	Q6G3I4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2865002.
GenomeReviews	Gene locus BH07840 in contig BX897699_GR.
KEGG	bhe:BH07840.
NMPDR	fig|283166.1.peg.723.
PATRIC	20545385. VBIBarHen29080_0836.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG304889.
OMA	VCVARPP.
PhylomeDB	Q6G3I4.
ProtClustDB	PRK05559.
Family and domain databases
InterPro	IPR003594. ATPase-like_ATP-bd. IPR020568. Ribosomal_S5_D2-typ_fold. IPR014721. Ribosomal_S5_D2-typ_fold_subgr. IPR001241. Topo_IIA. IPR013759. Topo_IIA_B/N_ab. IPR002288. Topo_IIA_B_C. IPR013506. Topo_IIA_bsu_dom2. IPR013760. Topo_IIA_cen. IPR018522. TopoIIA_CS. IPR005737. TopoIV_B_Gneg. [Graphical view]
Gene3D	G3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit. G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit. G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KO	K02622.
Pfam	PF00204. DNA_gyraseB. 1 hit. PF00986. DNA_gyraseB_C. 1 hit. PF02518. HATPase_c. 1 hit. [Graphical view]
PRINTS	PR00418. TPI2FAMILY.
SMART	SM00387. HATPase_c. 1 hit. SM00433. TOP2c. 1 hit. [Graphical view]
SUPFAM	SSF55874. ATP_bd_ATPase. 1 hit. SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit. SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMs	TIGR01055. ParE_Gneg. 1 hit.
PROSITE	PS00177. TOPOISOMERASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6G3I4_BARHE

Accession

Primary (citable) accession number: Q6G3I4

Entry history

Integrated into UniProtKB/TrEMBL:	July 19, 2004
Last sequence update:	July 19, 2004
Last modified:	January 25, 2012
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)