Q6FZH0 (SYR_BARQU) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Arginine--tRNA ligase
EC=6.1.1.19

Alternative name(s):
Arginyl-tRNA synthetase
Short name=ArgRS

Gene names

Name:	argS
Ordered Locus Names:	BQ07700

Organism

Bartonella quintana (strain Toulouse) (Rochalimaea quintana) [Complete proteome] [HAMAP]

Taxonomic identifier

283165 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bartonellaceae › Bartonella › Bartonella quintana

Protein attributes

Sequence length	585 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP-Rule MF_00123
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00123
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00123.
Sequence similarities	Belongs to the class-I aminoacyl-tRNA synthetase family.

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm
Ligand	ATP-binding Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	arginyl-tRNA aminoacylation Inferred from electronic annotation. Source: HAMAP
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	ATP binding Inferred from electronic annotation. Source: HAMAP arginine-tRNA ligase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 585	585	Arginine--tRNA ligase HAMAP-Rule MF_00123		PRO_0000241989
Regions
	Motif	131 – 141	11	"HIGH" region HAMAP-Rule MF_00123

Sequences

	Sequence		Length	Mass (Da)
	Q6FZH0 [UniParc]. Last modified July 19, 2004. Version 1. Checksum: 8F83C6CBA4265C27	FASTA	585	66,355
	10 20 30 40 50 60 MNVFKNFEKK IKKSLELSDI KGKNGEDLNL SKITVDPPRD SSHGHLSTNA AMVLAKSIGL 70 80 90 100 110 120 NPHALAEKII ELLKNDSSID CIDIAAPGFI NIKLTKSFWQ DAIKSMLKKG TSYGRIPMGQ 130 140 150 160 170 180 GKRINVEYVS ANPTGPMHVG HCRGAVFGDV LSNLLQFVGY NITKEYYIND AGKQIEVLAH 190 200 210 220 230 240 SVLLRYREAL GQKINEIPEG LYPGEYLIPL GQSLAQEFSD QLLTIDKDEA LSIVKERAIY 250 260 270 280 290 300 AMMSMIRKDL AALNIYHDIF FSERMLYADN ARAIRNTIND LTLNGYIYKG ELPPPKGQNT 310 320 330 340 350 360 EDWEPREQTL FRSTDVGDDQ DRVLVKSDGS YTYFAADVAY FRDKFNRHFD EMIYILGADH 370 380 390 400 410 420 AGYVKRLEAM AKAISGNSAK LSVFLCQLVK LFRNGHPVRM SKRAGSFVTL RDVVEEVGRD 430 440 450 460 470 480 PVRFMMLYRK CEAPLDFDFA KVTEQSKDNP IFYVQYASAR CHSVFRQAQE IFRIENVSND 490 500 510 520 530 540 TMIAHLNRLT DDNEIFLIRK LSEYPRIIEQ AVVHKEPHRL AFYLYDLASS FHAHWNKGSD 550 560 570 580 NFDLRFIQPD DKELSFARLG LIQAIMNILS SGLAIVGIEA ATEMR

References

[1]

"The louse-borne human pathogen Bartonella quintana is a genomic derivative of the zoonotic agent Bartonella henselae." Alsmark U.C.M., Frank A.C., Karlberg E.O., Legault B.-A., Ardell D.H., Canbaeck B., Eriksson A.-S., Naeslund A.K., Handley S.A., Huvet M., La Scola B., Holmberg M., Andersson S.G.E. Proc. Natl. Acad. Sci. U.S.A. 101:9716-9721(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Toulouse.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX897700 Genomic DNA. Translation: CAF26254.1.
RefSeq	YP_032398.1. NC_005955.1.
3D structure databases
ProteinModelPortal	Q6FZH0.
ModBase	Search...
Protein-protein interaction databases
STRING	283165.BQ07700.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAF26254; CAF26254; BQ07700.
GeneID	2866995.
KEGG	bqu:BQ07700.
PATRIC	31952841. VBIBarQui58630_0841.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0018.
HOGENOM	HOG000247214.
KO	K01887.
OMA	HTSANPN.
ProtClustDB	PRK01611.
Enzyme and pathway databases
BioCyc	BQUI283165:GHZA-769-MONOMER.
Family and domain databases
Gene3D	3.30.1360.70. 1 hit. 3.40.50.620. 1 hit.
HAMAP	MF_00123. Arg_tRNA_synth.
InterPro	IPR001412. aa-tRNA-synth_I_CS. IPR001278. Arg-tRNA-ligase_Ia. IPR015945. Arg-tRNA-synth_Ia_core. IPR005148. Arg-tRNA-synth_N. IPR008909. DALR_anticod-bd. IPR014729. Rossmann-like_a/b/a_fold. IPR009080. tRNAsynth_1a_anticodon-bd. [Graphical view]
PANTHER	PTHR11956. PTHR11956. 1 hit.
Pfam	PF03485. Arg_tRNA_synt_N. 1 hit. PF05746. DALR_1. 1 hit. PF00750. tRNA-synt_1d. 1 hit. [Graphical view]
PRINTS	PR01038. TRNASYNTHARG.
SMART	SM01016. Arg_tRNA_synt_N. 1 hit. SM00836. DALR_1. 1 hit. [Graphical view]
SUPFAM	SSF55190. Arg-tRNA-synth_Ic_N. 1 hit. SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMs	TIGR00456. argS. 1 hit.
PROSITE	PS00178. AA_TRNA_LIGASE_I. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

SYR_BARQU

Accession

Primary (citable) accession number: Q6FZH0

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 27, 2006
Last sequence update:	July 19, 2004
Last modified:	May 29, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program