Unreviewed, UniProtKB/TrEMBL Q6FIB4 (Q6FIB4_HUMAN)

Names and origin

Protein names

Submitted name:
    F11 receptor protein EMBL AAG28379.1
Submitted name:
    F11R protein EMBL CAG38543.1
    cDNA FLJ90671 fis, clone PLACE1005544, highly similar to Junctional adhesion molecule 1 EMBL BAC11436.1
    F11 receptor EMBL CAI15365.1
    F11 receptor, isoform CRA_c EMBL EAW52680.1
    JAM1 EMBL AAO84556.1

Gene names

Name:	F11R EMBL CAG38543.1
ORF Names:	RP11-544M22.2-001 EMBL CAI15365.1, hCG_20857 EMBL EAW52680.1

Organism

Homo sapiens (Human) EMBL CAG38543.1

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo

Protein attributes

Sequence length	299 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

Ontologies

Keywords
Domain	Immunoglobulin domain RuleBase RU003326V0
Molecular function	Receptor
Gene Ontology (GO)
Molecular function	receptor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6FIB4-1 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: D95DE2FEA23D2851	FASTA	299	32,583
	10 20 30 40 50 60 MGTKAQVERK LLCLFILAIL LCSLALGSVT VHSSEPEVRI PENNPVKLSC AYSGFSSPRV 70 80 90 100 110 120 EWKFDQGDTT RLVCYNNKIT ASYEDRVTFL PTGITFKSVT REDTGTYTCM VSEEGGNSYG 130 140 150 160 170 180 EVKVKLIVLV PPSKPTVNIP SSATIGNRAV LTCSEQDGSP PSEYTWFKDG IVMPTNPKST 190 200 210 220 230 240 RAFSNSSYVL NPTTGELVFD PLSASDTGEY SCEARNGYGT PMTSNAVRME AVERNVGVIV 250 260 270 280 290 AAVLVTLILL GILVFGIWFA YSRGHFDRTK KGTSSKKVIY SQPSARSEGE FKQTSSFLV

References

[1]	"Cloning of human full open reading frames in Gateway(TM) system entry vector (pDONR201)." Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B. Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	Harrison E. Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Signal sequence and keyword trap in silico for selection of full-length human cDNAs encoding secretion or membrane proteins from oligo-capped cDNA libraries." Otsuki T., Ota T., Nishikawa T., Hayashi K., Suzuki Y., Yamamoto J., Wakamatsu A., Kimura K., Sakamoto K., Hatano N., Kawai Y., Ishii S., Saito K., Kojima S., Sugiyama T., Ono T., Okano K., Yoshikawa Y. , Aotsuka S., Sasaki N., Hattori A., Okumura K., Nagai K., Sugano S., Isogai T. DNA Res. 12:117-126(2005) [PubMed: 16303743] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Placenta EMBL BAC11436.1.
[5]	"Identification and characterization of KAT, a novel gene preferentially expressed in several human cancer cell lines." Wenzel K., Felix S.B., Flachmeier C., Heere P., Schulze W., Grunewald I., Pankow H., Hewelt A., Scherneck S., Bauer D., Hoehe M.R. Biol. Chem. 384:763-775(2003) [PubMed: 12817473] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[6]	"Platelet agonist F11 receptor is a member of the immunoglobulin superfamily and identical with junctional adhesion molecule (JAM): regulation of expression in human endothelial cells and macrophages." Gupta S.K., Pillarisetti K., Ohlstein E.H. IUBMB Life 50:51-56(2000) [PubMed: 11087121] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[7]	"Cloning of human full-length CDSs in BD Creator(TM) System Donor vector." Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A. Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF191495 mRNA. Translation: AAG28379.1. AF490407 Genomic DNA. Translation: AAO84556.1. BT020103 mRNA. Translation: AAV38906.1. AK075152 mRNA. Translation: BAC11436.1. CR533512 mRNA. Translation: CAG38543.1. AL591806 Genomic DNA. Translation: CAI15365.1. CH471121 Genomic DNA. Translation: EAW52680.1.
RefSeq	NP_058642.1.
UniGene	Hs.517293
3D structure databases
SMR	Q6FIB4. Positions 25-233.
ModBase	Search...
Genome annotation databases
Ensembl	ENSG00000158769. Homo sapiens. [Contig view]
GeneID	50848.
KEGG	hsa:50848.
Organism-specific databases
HGNC	HGNC:14685. F11R.
GenAtlas	Search...
GeneCards	Search...
Phylogenomic databases
HOVERGEN	Q6FIB4.
Gene expression databases
ArrayExpress	Q6FIB4.
Family and domain databases
InterPro	IPR013151. Ig. IPR007110. Ig-like. IPR013783. Ig-like_fold. IPR003598. Ig_sub2. IPR013106. Ig_V-set. IPR003596. Ig_V-set_sub. [Graphical view]
Gene3D	G3DSA:2.60.40.10. Ig-like_fold. 2 hits.
Pfam	PF00047. ig. 1 hit. PF07686. V-set. 1 hit. [Graphical view]
SMART	SM00408. IGc2. 1 hit. SM00406. IGv. 1 hit. [Graphical view]
PROSITE	PS50835. IG_LIKE. 2 hits. [Graphical view]
Other Resources
NextBio	53317.

Entry information

Entry name

Q6FIB4_HUMAN

Accession

Primary (citable) accession number: Q6FIB4

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	November 25, 2008
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)