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Protein
Submitted name:

Non-structural protein

Gene

ns

Organism
Human parvovirus B19 (HPV B19)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Non-structural proteinImported
Gene namesi
Name:nsImported
OrganismiHuman parvovirus B19 (HPV B19)Imported
Taxonomic identifieri10798 [NCBI]
Taxonomic lineageiVirusesssDNA virusesParvoviridaeParvovirinaeErythroparvovirus
Virus hostiHomo sapiens (Human) [TaxID: 9606]

Structurei

3D structure databases

ProteinModelPortaliQ6EVB8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains SF3 helicase domain.SAAS annotation
Contains SFhelicase domain.SAAS annotation

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR014015. Helicase_SF3_DNA-vir.
IPR027417. P-loop_NTPase.
IPR001257. Parvovirus_NS1_helicase.
IPR014835. Rep_N.
[Graphical view]
PfamiPF01057. Parvo_NS1. 1 hit.
PF08724. Rep_N. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS51206. SF3_HELICASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q6EVB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GVLQISSNVL DCANDNWWCS LLDLDTSDWE PLTHTNRLMA IYLSSVASKL
60 70 80 90 100
DFTGGPLAGC LYFFQVECNK FEEGYHIHVV IGGPGLNPRN LTVCVEGLFN
110 120 130 140 150
NVLYHLVTGN VKLKFLPGMT TKGKYFRDGE QFIENYLMKK IPLNVVWCVT
160 170 180 190 200
NIDGYIDTCI SATFRRGACH AKKPRMTTAI NDTSSDAGES SGTGAEVVPF
210 220 230 240 250
NGKGTKASIK FQTMVNWLCE NRVFTEDKWK LVDFNQYTLL SSSHSGSFQI
260 270 280 290 300
QSALKLAIYK ATNLVPTSTF LLHTDFEQVM CIKDNKIVKL LLCQNYDPLL
310 320 330 340 350
VGQHVLKWID KKCGKKNTLW FYGPPSTGKT NLAMAIAKSV PVYGMVNWNN
360 370 380 390 400
ENFPFNDVAG KSLVVWDEGI IKSTIVEAAK AILGGQPTRV DQKMRGSVAV
410 420 430 440 450
PGVPVVITSN GDITFVVSGN TTTTVHAKAL KERMVKLNFT VRCSPDMGLL
460 470 480 490 500
TEADVQQWLT WCNAQSWDHY ENWAIYYTFD FPGINADALH PDLQTTPIVT
510 520 530 540 550
DTSISSSGGE SSEELSESSF FNLITPGAWN TETPRSSTPI PGTSSGESFV
560 570 580 590 600
GSPVSSEVVA ASWEEAFYTP LADQFRELLV GVDYVWDGVR GLPVCCVQHI
610 620 630 640 650
NNSGGGLGLC PHCINVGAWY NGWKFREFTP DLVRCSCHVG ASNPFSVLTC
660
KKCAYLSGLQ SFVDYE
Length:666
Mass (Da):73,442
Last modified:August 16, 2004 - v1
Checksum:i62CBD899176773D8
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ781033 Genomic DNA. Translation: CAG70323.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ781033 Genomic DNA. Translation: CAG70323.1.

3D structure databases

ProteinModelPortaliQ6EVB8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR014015. Helicase_SF3_DNA-vir.
IPR027417. P-loop_NTPase.
IPR001257. Parvovirus_NS1_helicase.
IPR014835. Rep_N.
[Graphical view]
PfamiPF01057. Parvo_NS1. 1 hit.
PF08724. Rep_N. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS51206. SF3_HELICASE_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Long-term parvovirus B19 viraemia associated with pure red cell aplasia after allogeneic bone marrow transplantation."
    Plentz A., Hahn J., Holler E., Jilg W., Modrow S.
    J. Clin. Virol. 31:16-19(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 3Imported.

Entry informationi

Entry nameiQ6EVB8_PAVHB
AccessioniPrimary (citable) accession number: Q6EVB8
Entry historyi
Integrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: October 29, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.