Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Ent-copalyl diphosphate synthase 1, chloroplastic

Gene

CPS1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalyzes the conversion of geranylgeranyl diphosphate to the gibberellin precursor ent-copalyl diphosphate.1 Publication

Miscellaneous

2 different ent-CDP synthases exist in rice, one being involved in gibberellin biosynthesis and the other in phytoalexins biosynthesis.

Catalytic activityi

Geranylgeranyl diphosphate = ent-copalyl diphosphate.

Cofactori

Mg2+Curated

Pathwayi: gibberellin biosynthesis

This protein is involved in the pathway gibberellin biosynthesis, which is part of Plant hormone biosynthesis.
View all proteins of this organism that are known to be involved in the pathway gibberellin biosynthesis and in Plant hormone biosynthesis.

GO - Molecular functioni

GO - Biological processi

  • gibberellin biosynthetic process Source: UniProtKB-UniPathway
  • gibberellin metabolic process Source: Gramene

Keywordsi

Molecular functionIsomerase
LigandMagnesium, Metal-binding

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-7941
UniPathwayiUPA00390

Names & Taxonomyi

Protein namesi
Recommended name:
Ent-copalyl diphosphate synthase 1, chloroplastic (EC:5.5.1.13)
Short name:
Ent-CDP synthase 1
Short name:
OsCPS1
Short name:
OsCPS1ent
Alternative name(s):
Ent-kaurene synthase A
OsCPS
Gene namesi
Name:CPS1
Ordered Locus Names:Os02g0278700, LOC_Os02g17780
ORF Names:P0444A09.11
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 35ChloroplastSequence analysisAdd BLAST35
ChainiPRO_000037232536 – 867Ent-copalyl diphosphate synthase 1, chloroplasticAdd BLAST832

Proteomic databases

PaxDbiQ6ET36

Expressioni

Developmental stagei

Expressed in developing pollen from 7 days before flowering.1 Publication

Gene expression databases

ExpressionAtlasiQ6ET36 differential
GenevisibleiQ6ET36 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g17780.1

Structurei

3D structure databases

ProteinModelPortaliQ6ET36
SMRiQ6ET36
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi418 – 421DXDD motif4

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi65 – 72Poly-Gly8

Domaini

The Asp-Xaa-Asp-Asp (DXDD) motif is important for the catalytic activity, presumably through binding to Mg2+.

Sequence similaritiesi

Belongs to the terpene synthase family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IHWJ Eukaryota
ENOG410XNXR LUCA
HOGENOMiHOG000241020
InParanoidiQ6ET36
KOiK04120
OMAiDFNRCQA
OrthoDBiEOG093603SF

Family and domain databases

Gene3Di1.10.600.10, 1 hit
1.50.10.130, 2 hits
InterProiView protein in InterPro
IPR008949 Isoprenoid_synthase_dom_sf
IPR001906 Terpene_synth_N
IPR036965 Terpene_synth_N_sf
IPR005630 Terpene_synthase_metal-bd
IPR008930 Terpenoid_cyclase/PrenylTrfase
PfamiView protein in Pfam
PF01397 Terpene_synth, 1 hit
PF03936 Terpene_synth_C, 1 hit
SUPFAMiSSF48239 SSF48239, 2 hits
SSF48576 SSF48576, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6ET36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIHLHSPPTA PAAFGGAGSA DWRRRRRWSW SSSSRAPVAK GGHLRPCVWR
60 70 80 90 100
RGGDDGGGED HHADGGGGGG GGAAWRARAT TAGVSSSSST AKGLQANIIE
110 120 130 140 150
HETPRITKWP NESRDLDDHQ QNNEADEEAD DELQPLVEQV RSMLSSMEDG
160 170 180 190 200
AITASAYDTA WVALVPRLDG EGGTQFPAAV RWIVGSQLAD GSWGDEALFS
210 220 230 240 250
AYDRVINTLA CVVALTRWSL HHDQCKQGLQ FLNLNLWRLA EEEPDTMPIG
260 270 280 290 300
FEIAFPSLVE AARGLGIDFP YDHPALKGIY ANRELKLKRI PKDMMHIVPT
310 320 330 340 350
SILHSLEGMP GLDWQRLLKL QCSDGSFLFS PSATAYALMQ TGDKKCFAYI
360 370 380 390 400
DRIIKKFDGG VPNVYPVDLF EHIWVVDRLE RLGISRYFQR EIEQNMDYVN
410 420 430 440 450
RHWTEDGICW ARNSNVKEVD DTAMAFRLLR LHGYNVSPSV FKNFEKDGEF
460 470 480 490 500
FCFVGQSTQA VTGMYNLNRA SQISFPGEDI LQRARNFSYE FLREREAQGT
510 520 530 540 550
LHDKWIISKD LPGEVQYTLD FPWYASLPRV EARTYIGQYG GNDDVWIGKT
560 570 580 590 600
LYRMPIVNNA TYLELAKQDF NRCQALHQHE LQGLQKWFIE NGLEAFGMTP
610 620 630 640 650
EDVLRAYFLA AACIFEPNRA SERLAWARVS VLANTISRHF YSDMSSMKRM
660 670 680 690 700
ERFMWSSLYE ENGNVLGLEG YAKDGILART LCQLIDLLSQ ETPPVREGQK
710 720 730 740 750
CIHNLIRCAW IEWMMQQINM KDGRYDKGRV MHPGSCTVHN KETCLLIAQI
760 770 780 790 800
VEICAGRIEE AASMINNTEG SWFIQLASSI CDSLHAKMLL SQDTKKNETT
810 820 830 840 850
INQIDKEIEL GMQELAQYLL PRVDDRRINN KTKQTFLSIV KSCYYAANCS
860
PHMLDQHISE VIFEQVI
Length:867
Mass (Da):98,055
Last modified:August 16, 2004 - v1
Checksum:i7D86B6D24B50FB31
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP004872 Genomic DNA Translation: BAD28184.1
AP008208 Genomic DNA Translation: BAF08464.1
AP014958 Genomic DNA Translation: BAS78107.1
AB126932 mRNA Translation: BAD42449.2
RefSeqiXP_015624005.1, XM_015768519.1
UniGeneiOs.16326

Genome annotation databases

EnsemblPlantsiOs02t0278700-01; Os02t0278700-01; Os02g0278700
GeneIDi4329013
GrameneiOs02t0278700-01; Os02t0278700-01; Os02g0278700
KEGGiosa:4329013

Similar proteinsi

Entry informationi

Entry nameiCPS1_ORYSJ
AccessioniPrimary (citable) accession number: Q6ET36
Secondary accession number(s): A0A0P0VHK1, Q68BJ4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: August 16, 2004
Last modified: May 23, 2018
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Cookie policy

We would like to use anonymized google analytics cookies to gather statistics on how uniprot.org is used in aggregate. Learn more

UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health