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Q6EN45

- P2C13_ORYSJ

UniProt

Q6EN45 - P2C13_ORYSJ

Protein

Probable protein phosphatase 2C 13

Gene

Os02g0255100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 74 (01 Oct 2014)
      Sequence version 1 (16 Aug 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    [a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

    Cofactori

    Binds 2 magnesium or manganese ions per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi147 – 1471Manganese 1By similarity
    Metal bindingi147 – 1471Manganese 2By similarity
    Metal bindingi148 – 1481Manganese 1; via carbonyl oxygenBy similarity
    Metal bindingi309 – 3091Manganese 2By similarity
    Metal bindingi348 – 3481Manganese 2By similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein serine/threonine phosphatase activity Source: InterPro

    GO - Biological processi

    1. protein dephosphorylation Source: InterPro

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase

    Keywords - Ligandi

    Magnesium, Manganese, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable protein phosphatase 2C 13 (EC:3.1.3.16)
    Short name:
    OsPP2C13
    Gene namesi
    Ordered Locus Names:Os02g0255100, LOC_Os02g15594
    ORF Names:OSJNBa0052K15.14
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 2

    Organism-specific databases

    GrameneiQ6EN45.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 363363Probable protein phosphatase 2C 13PRO_0000363259Add
    BLAST

    Proteomic databases

    PRIDEiQ6EN45.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6EN45.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini110 – 350241PP2C-likeAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi18 – 225Poly-Thr

    Sequence similaritiesi

    Belongs to the PP2C family.Curated
    Contains 1 PP2C-like domain.Curated

    Phylogenomic databases

    eggNOGiCOG0631.
    HOGENOMiHOG000233896.
    KOiK17506.
    OMAiETYKQTD.

    Family and domain databases

    Gene3Di3.60.40.10. 1 hit.
    InterProiIPR001932. PP2C-like_dom.
    IPR000222. PP2C_Mn2_Asp60_BS.
    IPR015655. Protein_Pase_2C.
    [Graphical view]
    PANTHERiPTHR13832. PTHR13832. 1 hit.
    PfamiPF00481. PP2C. 1 hit.
    [Graphical view]
    SMARTiSM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view]
    SUPFAMiSSF81606. SSF81606. 1 hit.
    PROSITEiPS01032. PP2C. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6EN45-1 [UniParc]FASTAAdd to Basket

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    MVCFASLRRA LPLLLRATTT TTPRFLLPRA LSGGVGGGAA VDARALLRGH    50
    SGWRGLRVAA RMMLDSSDSA AAAGQMQPQQ RAAGAVACSA QDGGAAGYAS 100
    GGWAREDGKL KCGYSSFRGK RATMEDFYDV KLTEIDGQAV SLFGVFDGHG 150
    GPRAAEYLKE NLFENLLKHP EFLTDTKLAI SETYQKTDTD FLESESNAFR 200
    DDGSTASTAV LVGGHLYVAN VGDSRAVVSK AGKAMALSED HKPNRSDERK 250
    RIENAGGVVI WAGTWRVGGV LAMSRAFGNR LLKPFVVAEP EIQEELVNED 300
    LECLVLASDG LWDVVENEEA VSLAKTEDLP ESVARKLTEI AYSRGSADNI 350
    TCIVVQFHHD KTE 363
    Length:363
    Mass (Da):38,958
    Last modified:August 16, 2004 - v1
    Checksum:iCD1318CCA7E043C7
    GO

    Sequence cautioni

    The sequence AK069289 differs from that shown. Reason: Erroneous termination at position 261. Translated as Trp.

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti261 – 2611Missing in AK069289. (PubMed:12869764)Curated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006844 Genomic DNA. Translation: BAD29690.1.
    AP008208 Genomic DNA. Translation: BAF08375.1.
    AK069289 mRNA. No translation available.
    RefSeqiNP_001046461.1. NM_001052996.1.
    UniGeneiOs.27158.

    Genome annotation databases

    EnsemblPlantsiOS02T0255100-01; OS02T0255100-01; OS02G0255100.
    GeneIDi4328913.
    KEGGiosa:4328913.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP006844 Genomic DNA. Translation: BAD29690.1 .
    AP008208 Genomic DNA. Translation: BAF08375.1 .
    AK069289 mRNA. No translation available.
    RefSeqi NP_001046461.1. NM_001052996.1.
    UniGenei Os.27158.

    3D structure databases

    ProteinModelPortali Q6EN45.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi Q6EN45.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS02T0255100-01 ; OS02T0255100-01 ; OS02G0255100 .
    GeneIDi 4328913.
    KEGGi osa:4328913.

    Organism-specific databases

    Gramenei Q6EN45.

    Phylogenomic databases

    eggNOGi COG0631.
    HOGENOMi HOG000233896.
    KOi K17506.
    OMAi ETYKQTD.

    Family and domain databases

    Gene3Di 3.60.40.10. 1 hit.
    InterProi IPR001932. PP2C-like_dom.
    IPR000222. PP2C_Mn2_Asp60_BS.
    IPR015655. Protein_Pase_2C.
    [Graphical view ]
    PANTHERi PTHR13832. PTHR13832. 1 hit.
    Pfami PF00481. PP2C. 1 hit.
    [Graphical view ]
    SMARTi SM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81606. SSF81606. 1 hit.
    PROSITEi PS01032. PP2C. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
      Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
      BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiP2C13_ORYSJ
    AccessioniPrimary (citable) accession number: Q6EN45
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: August 16, 2004
    Last modified: October 1, 2014
    This is version 74 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3