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Q6EN45

- P2C13_ORYSJ

UniProt

Q6EN45 - P2C13_ORYSJ

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Protein

Probable protein phosphatase 2C 13

Gene

Os02g0255100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi147 – 1471Manganese 1By similarity
Metal bindingi147 – 1471Manganese 2By similarity
Metal bindingi148 – 1481Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi309 – 3091Manganese 2By similarity
Metal bindingi348 – 3481Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein serine/threonine phosphatase activity Source: InterPro

GO - Biological processi

  1. protein dephosphorylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 13 (EC:3.1.3.16)
Short name:
OsPP2C13
Gene namesi
Ordered Locus Names:Os02g0255100, LOC_Os02g15594
ORF Names:OSJNBa0052K15.14
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 2

Organism-specific databases

GrameneiQ6EN45.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 363363Probable protein phosphatase 2C 13PRO_0000363259Add
BLAST

Proteomic databases

PRIDEiQ6EN45.

Structurei

3D structure databases

ProteinModelPortaliQ6EN45.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini110 – 350241PP2C-likeAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi18 – 225Poly-Thr

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PP2C-like domain.Curated

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000233896.
InParanoidiQ6EN45.
KOiK17506.
OMAiETYKQTD.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PP2C. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6EN45-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVCFASLRRA LPLLLRATTT TTPRFLLPRA LSGGVGGGAA VDARALLRGH
60 70 80 90 100
SGWRGLRVAA RMMLDSSDSA AAAGQMQPQQ RAAGAVACSA QDGGAAGYAS
110 120 130 140 150
GGWAREDGKL KCGYSSFRGK RATMEDFYDV KLTEIDGQAV SLFGVFDGHG
160 170 180 190 200
GPRAAEYLKE NLFENLLKHP EFLTDTKLAI SETYQKTDTD FLESESNAFR
210 220 230 240 250
DDGSTASTAV LVGGHLYVAN VGDSRAVVSK AGKAMALSED HKPNRSDERK
260 270 280 290 300
RIENAGGVVI WAGTWRVGGV LAMSRAFGNR LLKPFVVAEP EIQEELVNED
310 320 330 340 350
LECLVLASDG LWDVVENEEA VSLAKTEDLP ESVARKLTEI AYSRGSADNI
360
TCIVVQFHHD KTE
Length:363
Mass (Da):38,958
Last modified:August 16, 2004 - v1
Checksum:iCD1318CCA7E043C7
GO

Sequence cautioni

The sequence AK069289 differs from that shown. Reason: Erroneous termination at position 261. Translated as Trp.

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti261 – 2611Missing in AK069289. (PubMed:12869764)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006844 Genomic DNA. Translation: BAD29690.1.
AP008208 Genomic DNA. Translation: BAF08375.1.
AK069289 mRNA. No translation available.
RefSeqiNP_001046461.1. NM_001052996.1.
UniGeneiOs.27158.

Genome annotation databases

EnsemblPlantsiOS02T0255100-01; OS02T0255100-01; OS02G0255100.
GeneIDi4328913.
KEGGiosa:4328913.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP006844 Genomic DNA. Translation: BAD29690.1 .
AP008208 Genomic DNA. Translation: BAF08375.1 .
AK069289 mRNA. No translation available.
RefSeqi NP_001046461.1. NM_001052996.1.
UniGenei Os.27158.

3D structure databases

ProteinModelPortali Q6EN45.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi Q6EN45.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS02T0255100-01 ; OS02T0255100-01 ; OS02G0255100 .
GeneIDi 4328913.
KEGGi osa:4328913.

Organism-specific databases

Gramenei Q6EN45.

Phylogenomic databases

eggNOGi COG0631.
HOGENOMi HOG000233896.
InParanoidi Q6EN45.
KOi K17506.
OMAi ETYKQTD.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 1 hit.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 1 hit.
PROSITEi PS01032. PP2C. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C13_ORYSJ
AccessioniPrimary (citable) accession number: Q6EN45
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: August 16, 2004
Last modified: October 29, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3