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Protein

Probable protein phosphatase 2C 13

Gene

Os02g0255100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi147Manganese 1By similarity1
Metal bindingi147Manganese 2By similarity1
Metal bindingi148Manganese 1; via carbonyl oxygenBy similarity1
Metal bindingi309Manganese 2By similarity1
Metal bindingi348Manganese 2By similarity1

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 13 (EC:3.1.3.16)
Short name:
OsPP2C13
Gene namesi
Ordered Locus Names:Os02g0255100, LOC_Os02g15594
ORF Names:OSJNBa0052K15.14
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 2

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003632591 – 363Probable protein phosphatase 2C 13Add BLAST363

Proteomic databases

PaxDbiQ6EN45.
PRIDEiQ6EN45.

Expressioni

Gene expression databases

ExpressionAtlasiQ6EN45. baseline and differential.
GenevisibleiQ6EN45. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os02g15594.1.

Structurei

3D structure databases

ProteinModelPortaliQ6EN45.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini111 – 357PPM-type phosphatasePROSITE-ProRule annotationAdd BLAST247

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi18 – 22Poly-Thr5

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PPM-type phosphatase domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0698. Eukaryota.
COG0631. LUCA.
HOGENOMiHOG000233896.
InParanoidiQ6EN45.
KOiK17506.
OMAiPNRNDER.
OrthoDBiEOG09360FJK.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR015655. PP2C.
IPR000222. PP2C_BS.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6EN45-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVCFASLRRA LPLLLRATTT TTPRFLLPRA LSGGVGGGAA VDARALLRGH
60 70 80 90 100
SGWRGLRVAA RMMLDSSDSA AAAGQMQPQQ RAAGAVACSA QDGGAAGYAS
110 120 130 140 150
GGWAREDGKL KCGYSSFRGK RATMEDFYDV KLTEIDGQAV SLFGVFDGHG
160 170 180 190 200
GPRAAEYLKE NLFENLLKHP EFLTDTKLAI SETYQKTDTD FLESESNAFR
210 220 230 240 250
DDGSTASTAV LVGGHLYVAN VGDSRAVVSK AGKAMALSED HKPNRSDERK
260 270 280 290 300
RIENAGGVVI WAGTWRVGGV LAMSRAFGNR LLKPFVVAEP EIQEELVNED
310 320 330 340 350
LECLVLASDG LWDVVENEEA VSLAKTEDLP ESVARKLTEI AYSRGSADNI
360
TCIVVQFHHD KTE
Length:363
Mass (Da):38,958
Last modified:August 16, 2004 - v1
Checksum:iCD1318CCA7E043C7
GO

Sequence cautioni

The sequence AK069289 differs from that shown. Reason: Erroneous termination at position 261. Translated as Trp.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti261Missing in AK069289 (PubMed:12869764).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006844 Genomic DNA. Translation: BAD29690.1.
AP008208 Genomic DNA. Translation: BAF08375.1.
AP014958 Genomic DNA. Translation: BAS77942.1.
AK069289 mRNA. No translation available.
RefSeqiXP_015625481.1. XM_015769995.1.
UniGeneiOs.27158.

Genome annotation databases

EnsemblPlantsiOS02T0255100-01; OS02T0255100-01; OS02G0255100.
GeneIDi4328913.
GrameneiOS02T0255100-01; OS02T0255100-01; OS02G0255100.
KEGGiosa:4328913.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP006844 Genomic DNA. Translation: BAD29690.1.
AP008208 Genomic DNA. Translation: BAF08375.1.
AP014958 Genomic DNA. Translation: BAS77942.1.
AK069289 mRNA. No translation available.
RefSeqiXP_015625481.1. XM_015769995.1.
UniGeneiOs.27158.

3D structure databases

ProteinModelPortaliQ6EN45.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os02g15594.1.

Proteomic databases

PaxDbiQ6EN45.
PRIDEiQ6EN45.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS02T0255100-01; OS02T0255100-01; OS02G0255100.
GeneIDi4328913.
GrameneiOS02T0255100-01; OS02T0255100-01; OS02G0255100.
KEGGiosa:4328913.

Phylogenomic databases

eggNOGiKOG0698. Eukaryota.
COG0631. LUCA.
HOGENOMiHOG000233896.
InParanoidiQ6EN45.
KOiK17506.
OMAiPNRNDER.
OrthoDBiEOG09360FJK.

Gene expression databases

ExpressionAtlasiQ6EN45. baseline and differential.
GenevisibleiQ6EN45. OS.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR015655. PP2C.
IPR000222. PP2C_BS.
IPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP2C13_ORYSJ
AccessioniPrimary (citable) accession number: Q6EN45
Secondary accession number(s): A0A0P0VH70
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: August 16, 2004
Last modified: October 5, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.