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Q6EDL3 (Q6EDL3_9PASE) Unreviewed, UniProtKB/TrEMBL

Last modified November 2, 2010. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Recombination activating protein 2 EMBL AAR16647.1
Gene names
Name:RAG2 EMBL AAR16647.1
OrganismParamythia montium (crested berrypecker) EMBL AAR16647.1
Taxonomic identifier254574 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Archosauria › Dinosauria › Saurischia › Theropoda › Coelurosauria › Aves › Neognathae › Passeriformes › Passeroidea › Paramythiidae › Paramythia

Protein attributes

Sequence length384 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological processDNA recombination

Inferred from electronic annotation. Source: InterPro

   Cellular componentnucleus

Inferred from electronic annotation. Source: InterPro

   Molecular functionDNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAR16647.1
Non-terminal residue3841 EMBL AAR16647.1

Sequences

Sequence LengthMass (Da)Tools
Q6EDL3 [UniParc].

Last modified August 16, 2004. Version 1.
Checksum: 4890025CB32DAC01

FASTA38442,695
        10         20         30         40         50         60 
RSCPTGVFLL DVKQNELKMK PAFFSKDSCY LPPLRYPALC TLRSXAKADE YQYIIHGGKT 

        70         80         90        100        110        120 
PNNDLSDKIY FMSLVSKTSK KMTFQCIEKD LGGDVPEARY GHTINVVHSR GKSMSVLFGG 

       130        140        150        160        170        180 
RSYTPLAQRT TEKWNSVVDC LPCVFLIDFE FGCCTSYILP ELQDGLSFHV SVARDDTIYI 

       190        200        210        220        230        240 
LGGHSLQNNT RSPNLYKLKI DLPLGSPAVT CTILPGGISV SSAIVTQISD TEFVLVGGYH 

       250        260        270        280        290        300 
SDNQKRLACN TLVLEDSKIE IVESVSPEWT PDIKHCRMWF GCDMGKGSVL LGIPGANKQL 

       310        320        330        340        350        360 
IPDANYFYIL RCKGAEEDKE EESITQICSQ TSSEDPGDST PFEDSEEFCF SAEANSFDVD 

       370        380 
DDDTYNEDDE EDESETGYWI TCCA

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References

[1]"Phylogeny and diversification of the largest avian radiation."
Barker F.K., Cibois A., Schikler P., Feinstein J., Cracraft J.
Proc. Natl. Acad. Sci. U.S.A. 101:11040-11045(2004) [PubMed: 15263073] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY443192 Genomic DNA. Translation: AAR16647.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG006694.

Family and domain databases

InterProIPR011043. Gal_Oxase/kelch_b-propeller.
IPR015915. Kelch-typ_b-propeller.
IPR004321. RAG2.
[Graphical view]
Gene3DG3DSA:2.120.10.80. Kelch-typ_b-propeller. 1 hit.
PANTHERPTHR10960. RAG2. 1 hit.
PfamPF03089. RAG2. 1 hit.
[Graphical view]
SUPFAMSSF50965. Gal_oxid_central. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ6EDL3_9PASE
AccessionPrimary (citable) accession number: Q6EDL3
Entry history
Integrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: November 2, 2010
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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