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Protein
Submitted name:

60S ribosomal protein L9

Gene

rpl9

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-DRE-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-DRE-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-DRE-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-DRE-72689. Formation of a pool of free 40S subunits.
R-DRE-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-DRE-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-DRE-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L9Imported
Submitted name:
Ribosomal protein L9Imported
Gene namesi
Name:rpl9Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 1

Organism-specific databases

ZFINiZDB-GENE-030131-8646. rpl9.

Subcellular locationi

GO - Cellular componenti

Expressioni

Gene expression databases

BgeeiENSDARG00000037350.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000054339.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 85Ribosomal_L6InterPro annotationAdd BLAST74
Domaini99 – 178Ribosomal_L6InterPro annotationAdd BLAST80

Phylogenomic databases

eggNOGiKOG3255. Eukaryota.
COG0097. LUCA.
GeneTreeiENSGT00390000015224.
HOGENOMiHOG000039905.
HOVERGENiHBG000942.
KOiK02940.
OrthoDBiEOG091G0R6Z.
TreeFamiTF300033.

Family and domain databases

Gene3Di3.90.930.12. 2 hits.
InterProiView protein in InterPro
IPR000702. Ribosomal_L6.
IPR020040. Ribosomal_L6_a/b-dom.
IPR002359. Ribosomal_L6_CS2.
PANTHERiPTHR11655. PTHR11655. 1 hit.
PfamiView protein in Pfam
PF00347. Ribosomal_L6. 2 hits.
PIRSFiPIRSF002162. Ribosomal_L6. 1 hit.
SUPFAMiSSF56053. SSF56053. 2 hits.
PROSITEiView protein in PROSITE
PS00700. RIBOSOMAL_L6_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6DRM3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTILSNQTV DIPDNVTVSL KGRTVTVKGP RGVLRREFNH INLELSLLGK
60 70 80 90 100
KQKKLRVDKW WGNRKELATV RTICSHVQNM IKGVTLGFRY KMRSVYAHFP
110 120 130 140 150
INVVIQESGS LVEIRNFLGE KYIRRVRMRQ GVACAVSAAQ KDELVLEGND
160 170 180 190
IELVSNSAAL IQQATTVRKK DIRKFLDGIY VSEKGTVVEQ QED
Length:193
Mass (Da):21,909
Last modified:August 16, 2004 - v1
Checksum:i23E34084FE08A21B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR759875 Genomic DNA. No translation available.
AY648736 mRNA. Translation: AAT68054.1.
RefSeqiNP_001003861.1. NM_001003861.1.
XP_005170963.1. XM_005170906.3.
UniGeneiDr.29079.

Genome annotation databases

EnsembliENSDART00000054340; ENSDARP00000054339; ENSDARG00000037350.
GeneIDi336702.
KEGGidre:336702.

Similar proteinsi

Entry informationi

Entry nameiQ6DRM3_DANRE
AccessioniPrimary (citable) accession number: Q6DRM3
Entry historyiIntegrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: August 30, 2017
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported