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Protein
Submitted name:

MGC84307 protein

Gene

cox4i2

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
MGC84307 proteinImported
Gene namesi
Name:cox4i2Imported
Synonyms:MGC84307Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-6254169. cox4i2.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei107 – 12519HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

ProteinModelPortaliQ6DJG5.
SMRiQ6DJG5. Positions 33-174.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOVERGENiHBG051087.
KOiK02263.

Family and domain databases

Gene3Di1.10.442.10. 1 hit.
InterProiIPR013288. Cyt_c_oxidase_su4.
IPR004203. Cyt_c_oxidase_su4_fam.
[Graphical view]
PANTHERiPTHR10707. PTHR10707. 1 hit.
PfamiPF02936. COX4. 1 hit.
[Graphical view]
PRINTSiPR01873. CYTCOXIDASE4.
SUPFAMiSSF81406. SSF81406. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6DJG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSALRLRLA LLPQIRLLGP HSLRAAHSHE GQVSRSDGSE LLYYDHRAFP
60 70 80 90 100
LPDIPFQTEL SSQQVTLKER ERGPWKQLSQ EDKISLYHIK FNQTYAEINR
110 120 130 140 150
PSNEWKTVFG AIFIFFGLTG LIVWWQRVYV YPPQPHTLAD DWKAMQIRRM
160 170
LDMRVSPIQG FSSNWDYEKN EWKK
Length:174
Mass (Da):20,572
Last modified:August 16, 2004 - v1
Checksum:iA5276ABD7A0B8612
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC075214 mRNA. Translation: AAH75214.1.
RefSeqiNP_001086386.1. NM_001092917.1.
UniGeneiXl.23896.

Genome annotation databases

GeneIDi444815.
KEGGixla:444815.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC075214 mRNA. Translation: AAH75214.1.
RefSeqiNP_001086386.1. NM_001092917.1.
UniGeneiXl.23896.

3D structure databases

ProteinModelPortaliQ6DJG5.
SMRiQ6DJG5. Positions 33-174.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi444815.
KEGGixla:444815.

Organism-specific databases

CTDi84701.
XenbaseiXB-GENE-6254169. cox4i2.

Phylogenomic databases

HOVERGENiHBG051087.
KOiK02263.

Family and domain databases

Gene3Di1.10.442.10. 1 hit.
InterProiIPR013288. Cyt_c_oxidase_su4.
IPR004203. Cyt_c_oxidase_su4_fam.
[Graphical view]
PANTHERiPTHR10707. PTHR10707. 1 hit.
PfamiPF02936. COX4. 1 hit.
[Graphical view]
PRINTSiPR01873. CYTCOXIDASE4.
SUPFAMiSSF81406. SSF81406. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: EyeImported.

Entry informationi

Entry nameiQ6DJG5_XENLA
AccessioniPrimary (citable) accession number: Q6DJG5
Entry historyi
Integrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: December 9, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.